Detail information of GWHGAAEX016141/evm.TU.scaffold_73.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25620Protein phosphatase 2 regulatory subunit
nrgi|672169083|ref|XP_008804564.1|0PREDICTED: probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 [Phoenix dactylifera]
Swissprottr|Q9FEE2|TON2_ARATH0Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
trEMBLtr|A0A068TRF4|A0A068TRF4_COFCA0Coffea canephora
TAIRAT5G185800tonneau 2 (TON2)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007613730511434056+
Transcript Sequence

Network for GWHGAAEX016141

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_72973991.10E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11583PPP2R3 mRNA surveillance pathway map03015
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.370
SRR2545915Juvenile tuber19.740
SRP108465SRR5643513five period of Gastrodia elata18.060
SRR5643514five period of Gastrodia elata17.160
SRR5643515five period of Gastrodia elata19.000
SRR5643524five period of Gastrodia elata16.320
SRR5643525five period of Gastrodia elata25.070
SRR5643528five period of Gastrodia elata29.190
SRR5643658five period of Gastrodia elata31.440
SRR5643659five period of Gastrodia elata17.590
SRR5643660five period of Gastrodia elata18.550
SRR5643661five period of Gastrodia elata16.090
SRR5643662five period of Gastrodia elata17.830
SRR5643663five period of Gastrodia elata18.010
SRR5643664five period of Gastrodia elata15.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.040
SRR6049655Rhizomagastrodiae_C368-T10_good_113.890
SRR6049656Rhizomagastrodiae_C368-T07_good_120.540
SRR6049657Rhizomagastrodiae_C368-T07_good_121.610
SRR6049658Rhizomagastrodiae_C368-T04_good_121.600
SRR6049659Rhizomagastrodiae_C368-T04_good_122.290
SRR6049660Rhizomagastrodiae_C368-T01_good_120.060
SRR6049661Rhizomagastrodiae_C368-T04_good_120.040
SRR6049662Rhizomagastrodiae_C368-T01_good_125.570
SRR6049663Rhizomagastrodiae_C368-T01_good_122.210
SRR6049664Rhizomagastrodiae_C368-T10_good_123.860
SRR6049665Rhizomagastrodiae_C368-T10_good_123.860
SRP279888GastroGastrodia elata tuber 20.32
JuvenJuvenile tuber16.84
Mother_GastroMother tuber of Gastrodia elata 24.23
Mother_JuvenMother tuber of Juvenile 21.74