Detail information of GWHGAAEX016149/evm.TU.scaffold_73.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218779469|ref|YP_002430787.1|3.00E-26peptidase S10 serine carboxypeptidase [Desulfatibacillum alkenivorans AK-01]
KOGKOG12820Serine carboxypeptidases (lysosomal cathepsin A)
nrgi|672134787|ref|XP_008791046.1|0PREDICTED: serine carboxypeptidase-like 45 [Phoenix dactylifera]
Swissprottr|Q93Y09|SCP45_ARATH0Serine carboxypeptidase-like 45 (Precursor)
trEMBLtr|D7TYT7|D7TYT7_VITVI0Carboxypeptidase {ECO:0000256|RuleBase:RU361156}
TAIRAT1G281100serine carboxypeptidase-like 45

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007617536811756492+
Transcript Sequence

Network for GWHGAAEX016149

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00450.21Peptidase_S10304469.60E-122
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004185Molecular Functionserine-type carboxypeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.590
SRR2545915Juvenile tuber10.330
SRP108465SRR5643513five period of Gastrodia elata25.190
SRR5643514five period of Gastrodia elata29.270
SRR5643515five period of Gastrodia elata19.420
SRR5643524five period of Gastrodia elata26.850
SRR5643525five period of Gastrodia elata0.710
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.890
SRR5643659five period of Gastrodia elata0.600
SRR5643660five period of Gastrodia elata0.220
SRR5643661five period of Gastrodia elata0.390
SRR5643662five period of Gastrodia elata0.110
SRR5643663five period of Gastrodia elata0.290
SRR5643664five period of Gastrodia elata0.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.030
SRR6049655Rhizomagastrodiae_C368-T10_good_123.040
SRR6049656Rhizomagastrodiae_C368-T07_good_130.770
SRR6049657Rhizomagastrodiae_C368-T07_good_119.080
SRR6049658Rhizomagastrodiae_C368-T04_good_112.290
SRR6049659Rhizomagastrodiae_C368-T04_good_15.360
SRR6049660Rhizomagastrodiae_C368-T01_good_118.320
SRR6049661Rhizomagastrodiae_C368-T04_good_121.690
SRR6049662Rhizomagastrodiae_C368-T01_good_145.550
SRR6049663Rhizomagastrodiae_C368-T01_good_128.490
SRR6049664Rhizomagastrodiae_C368-T10_good_140.410
SRR6049665Rhizomagastrodiae_C368-T10_good_140.410
SRP279888GastroGastrodia elata tuber 0.55
JuvenJuvenile tuber0.63
Mother_GastroMother tuber of Gastrodia elata 3.64
Mother_JuvenMother tuber of Juvenile 0.51