Detail information of GWHGAAEX016150/evm.TU.scaffold_73.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34672.00E-66Histone H4
nrgi|195617694|gb|ACG30677.1|8.72E-66histone H4 [Zea mays]
Swissprottr|P0CG89|H4_SOYBN7.00E-67Histone H4
trEMBLtr|Q5NSW2|Q5NSW2_FRAAN5.00E-65Histone H4 {ECO:0000256|RuleBase:RU000528} (Fragment)
TAIRAT5G599702.00E-66Histone superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007617755581776574-
Transcript Sequence

Network for GWHGAAEX016150

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15511.5CENP-T_C35961.40E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity
GO:0003677Molecular FunctionDNA binding
GO:0000786Cellular Componentnucleosome
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.610
SRR2545915Juvenile tuber49.380
SRP108465SRR5643513five period of Gastrodia elata198.720
SRR5643514five period of Gastrodia elata297.140
SRR5643515five period of Gastrodia elata163.140
SRR5643524five period of Gastrodia elata237.940
SRR5643525five period of Gastrodia elata95.870
SRR5643528five period of Gastrodia elata61.120
SRR5643658five period of Gastrodia elata44.900
SRR5643659five period of Gastrodia elata40.030
SRR5643660five period of Gastrodia elata40.490
SRR5643661five period of Gastrodia elata40.920
SRR5643662five period of Gastrodia elata42.490
SRR5643663five period of Gastrodia elata42.380
SRR5643664five period of Gastrodia elata34.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1103.270
SRR6049655Rhizomagastrodiae_C368-T10_good_164.030
SRR6049656Rhizomagastrodiae_C368-T07_good_1170.670
SRR6049657Rhizomagastrodiae_C368-T07_good_197.100
SRR6049658Rhizomagastrodiae_C368-T04_good_191.220
SRR6049659Rhizomagastrodiae_C368-T04_good_168.050
SRR6049660Rhizomagastrodiae_C368-T01_good_199.320
SRR6049661Rhizomagastrodiae_C368-T04_good_1109.820
SRR6049662Rhizomagastrodiae_C368-T01_good_1181.080
SRR6049663Rhizomagastrodiae_C368-T01_good_1118.020
SRR6049664Rhizomagastrodiae_C368-T10_good_1216.350
SRR6049665Rhizomagastrodiae_C368-T10_good_1216.350
SRP279888GastroGastrodia elata tuber 76.97
JuvenJuvenile tuber69.06
Mother_GastroMother tuber of Gastrodia elata 197.84
Mother_JuvenMother tuber of Juvenile 47.78