Gene detail

Detail information of GWHGAAEX016154/evm.TU.scaffold_73.72

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|189184220\|ref\|YP_001938005.1\|	4.00E-119	hypothetical protein OTT_1313 [Orientia tsutsugamushi str. Ikeda]
KOG	KOG2620	4.00E-172	Prohibitins and stomatins of the PID superfamily
nr	gi\|695041031\|ref\|XP_009408112.1\|	0	PREDICTED: stomatin-like protein 2, mitochondrial [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0TEQ6\|M0TEQ6_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P04660_001}
TAIR	AT4G27580	4.00E-172	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000076	1825131	1840797	+

Transcript Sequence
>GWHTAAEX016154 AAAACTACCACATTATCAATATCTTAATTTGACGATTTTATTGGCGCACTGATTAGTGCATCCCAACAACTCGCCCATTTTTGCTTTTATCGCTAGAAGGGTTTCCTTCGACAGCAAAGGAATATGGCTCTGCCGAGAGCAAGACGATCCGATATCGCTCTGGCTTCTTCTCTCTTCCACCTCGCTGCTGCATCCCTCCGGCGACAAAATCCGATAAACTTTAATCGATCCCCTGTCATCGTCCTTCTCCGTCACTTCCGTTCTGGCCGCTCCCGCGACGACTTCTCGGTATCGCGCAGCTATGAGCAGCCAGGGCCTCCGACAAACTGGGGCATCCGCATTGTCCCCGAGAAGAAGGCGTGCGTGGTGGAACGCTTCGGGAAGTATCTTAAGACCCTATCCTCTGGGATCCATCTCCTTGTTCCTCTAGTTGATAGAATCGCTTATGTTCACTCCCTGAAGGAAGAGGCGATCCCGATCCCGGACCAGTCCGCCATCACCAAGGATAATGTTAGCATACTCATTGACGGAGTTTTGTACGTCAAGATCGTTGACCCGTTTCTTGCTTCATATGGAGTGGAGAACCCGATCTTTGCGGTGATTCAGCTGGCTCAAACTACTATGAGGAGTGAGCTTGGGAAGATTACTCTTGACAAGACATTCGAAGAACGGGATACCCTTAATGAGAACATTGTGAGGGCAATTAATGAGGCTGCTACTGATTGGGGGTTGAAATGTCTTCGTTATGAAATAAGGGATATATCTCCTCCTCCTGGAGTGAAAGCAGCCATGGAGATGCAAGCTGAGGCAGAGCGAAGAAAACGTGCACAAGTACTGGAGTCTGAAGGAGAGAGACAGTCAAATATAAATATTGCTGATGGCAAGAAAAATTCTGTGATCTTGGAATCAGAAGCTGCAATGATGGATCAGGTGAATAGGGCTAAAGGTGAAGCTGAAGCCATACTTGCCAGATCTCGAGCGACTGCTGAAGGACTCAAAATGTTGTCAGAGGCAATTAAAGCAGATGGGGGTGCTGAGGCAGCAAGCCTAAGGGTTGCTGAGCAATACATTACAGCATTCTCCTCAATAGCAAAGGAGGGAACAACTATGTTGCTGCCAACTTCTGCTGGCAATCCTTCTTCTATGATAGCTCAAGCCCTTTCAATATACAAAGCTCTTCAGGTGGGCGGCTCCAATGCCCTGGTTTCCGGAGGAGAACAGGACGGTCGAGATCTTAAAGGAACAGTAGCCGCTGACACTGCTCATTCGTGGTCACCTTCCCTATCCAATACTTTGACTCCGACTACGGATTCCAGCAGTAAGGGTTTCTCTCTTGCAAAGCCATATAATGAGGAATAGCCTATGTTTCAATTCGAGTTATATCACGGAAAATAAACCAACATTTTTCTCAATCTGTTGTTTTTTGACTCCCTTCATTTTCTTCGTCTTCTTCGAACACCCTGTTATCAAAGCTGTACTCTCTCTATTCTTACTAACTTTTCAACAGCAAGAATGTGGCTTACATTTTTTTCCCATGATTTCAAATTTATTGATCAAAATAGGGATTGATAAAAAGAATTTGATTTGACAAATTATATGTTAATTTGTTTAATTTTTGTTTATATTTTTATTGTCAATAGTACTGATCACAGCATTCCCTTCTCTTCTCCTTTATTAAACAAAGAAAATTTAATATTCTGCAAATATACCATCAACACAACAAAGCAAACCAAGCAGCACTCTTTCTCCATTCTATTCATCGCTTTCAGCATCATCAGTGGCCTCATCTTTTGTCTTGGCGCCCTTCTTTCCATCTTCTACTTTATCCTTCTTCTTGATCTTCTCTTCATCACCATCGCCATGAACTACATCCCCCTCCTCCCTTCCGTCCCCTGCCACATAATCTTGAATGATAAGATGAATGCCGGGATCCTCCGCACCACAGCTGCCGCCAATCACGATCGAGTTGTTGATGCTCTGACAGTTGCTGTTTGCAAATGCTTCCGTGCCTTCACTGCCGCCACGATGAGCGGCAGCGGAGATGTGATCTGTAATGGCCACTGCATCTGGCCCGTTCATCTTCATCATCGCCCCTTTGTTGGTTCCAGCAAGTGTGATGATTCCGGCAGAATCATCGAAGCTGGTGCCGCTGGCTTTTCCGAGCCCTGTGAGGATTGAGATCACATCGCGCAACTCGCGGTTAAGCTGGTGGCTTTGTTCTTTGGCCGGCGGAGAAGACATGTGGAGAGGATATGGCCTAAGCCTAAAGTAAGTCCCTAAGGAATTTTTGAGAGTGCTCGGTAGGTGTTGGTACTTATATGTGAACGAGGGCATAATGTTACCTTGATGATGAAGGGAAGGGAAAGAATGCGTGCATGAGAGGGAGAGAGTTTTGGCATTTGATTTCCCTATGCTTTTCTTGTGAGTTAATCCAGCAGCAGAAGCCTTTGGTTATTATATAACTTTATCATTAGGGAAATTGAGAGCTCCTTTGTACGAGCGTGAAAAATGAAATTGTTGATCAAATTTCTTTTATTTTAGTGCTCATTTTTAGTCG

Network for GWHGAAEX016154

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01145.24	Band_7	73	243	1.80E-28
PF16200.4	Band_7_C	293	353	6.80E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.350
SRP064423	SRR2545915	Juvenile tuber	16.100
SRP108465	SRR5643513	five period of Gastrodia elata	19.250
	SRR5643514	five period of Gastrodia elata	25.380
	SRR5643515	five period of Gastrodia elata	19.350
	SRR5643524	five period of Gastrodia elata	24.660
	SRR5643525	five period of Gastrodia elata	11.550
	SRR5643528	five period of Gastrodia elata	16.440
	SRR5643658	five period of Gastrodia elata	14.580
	SRR5643659	five period of Gastrodia elata	12.830
	SRR5643660	five period of Gastrodia elata	9.370
	SRR5643661	five period of Gastrodia elata	11.330
	SRR5643662	five period of Gastrodia elata	11.260
	SRR5643663	five period of Gastrodia elata	11.410
	SRR5643664	five period of Gastrodia elata	10.460
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.390
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	24.300
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	15.210
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.550
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.130
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	17.430
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.970
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	28.390
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	20.790
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	28.970
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	28.970
SRP279888	Gastro	Gastrodia elata tuber	13.11
	Juven	Juvenile tuber	10.89
	Mother_Gastro	Mother tuber of Gastrodia elata	13.94
	Mother_Juven	Mother tuber of Juvenile	12.80