Gene detail

Detail information of GWHGAAEX016167/evm.TU.scaffold_73.86

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672198067\|ref\|XP_008777231.1\|	PREDICTED: uncharacterized protein LOC103697202 [Phoenix dactylifera]
trEMBL	tr\|D7TFK4\|D7TFK4_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI29277.3}
TAIR	AT5G13390	no exine formation 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000076	2044314	2074015	-

Transcript Sequence
>GWHTAAEX016167 CAAATGTGACCCGAATGCGGCTTAATGATGATGCTCTGATTTCACCCGTATTGGTCGGTCGCTTCATGTCCTAACCCTGCGTGCACTTCTGCAGTCCGCGTCAAAGGGGTCGTCGCTTGGCGCGCAGCGCTGCCGGAAACATCAAATCCATCGCCGGGAGCTCTTTCCCTGTCTAATCAATAGTAAGATTCGGAGACCTAATCTGGTCGCCGTTCGTTCTTGATCTGTTCAGGAAGTATCCATCATCAGATCAGACTTTCTGCTTCGACAAATCCATAATGCCCGTTACCTGTGGGAGCAGCTTTCTTCCTTCACTGTCATCCAAACCCTAGAAACGAACATACCAAGGTTTTCTGGTCAGCTTTCAGATTGCCACTATGCTGTTCGACGAGTCGTCCCTCTCCCGCCACTCACATCATCGCGCCTACATCTCCCCCATGAGTGCCCCATTATTCCCGTCCTTCTCAGGCAGCGGCGGAGGCGACAGCCCGAGCCCTCTCCGACCCTCTCCTTCCTCGTCCACACCGTCTTCCTCTGTCTCACGCATCCACACCACACCCTCCTTTGCCTACAACGCCCGCATCGCTCTTGCCCTCGTCCCAGCTGCGGCCTTCCTCCTCGATCTCGGCGGCGTACCCGTTGCCGTGGTCCTTACCATCGGTTTGATGGTCGCTTACATCTTTGACTCCCTCCGCTTAAAATCGGCTGCCTTTTTTGCGGTTTGGTTCTCCCTCATCGCGGCTCAGCTCGCTTTCTTTGCATCTGCCTCCTCTTCCCTCACAGCTTCTTCCTCCATCTCGTCCACCCCCCTAATTGTACTAGCACTCCTACTCTGCGCGGAGACTTCTTTTCTCATCGGCATATGGGCTTCTCTCCAATTCCGCTGGATCCAGATCGAGAACCCCTCAATCGTGACCTCCCTCGAGCGTCTCCTCTTCGCCTGCATCCCAGTAACTACTCCCGCTATTTTCACTTGGGCCGTAATCTCAGCTCTTGGCATGGCTAATGCTGCTTATTACTTCTTGGCCTTTGCCTGCCTTTTCTACTGGCTCTACTCTTTGCCTTGCTCCTCCTCTTTCCGGTCTAAGAACGAACCATCTGCTGACTCCCAAATACTCGGCTCGTTGGAGAGTTGTATCCATACACTCTATTTGCTATTTGCACCCCTTCTTTTCCATTTAGCCTCCCACTACTCGACTTCCTTCTCTTCTTTCTCCTCTATTTGTGATCTATTGCTGCTCTTTTTTATACCTTTCTCTTTCCAACTTTATGCCTCCACAAGAGGGGCGCTTTGGTGGGTCACCAAAAATGAAGTTCAGATTCAGAGGATTCGGGTGGTAAATGGAGCGGTGGCAATGGTGGTTGTAGTGATCTGCCTTGAAATTAGGGTTGTGTTCCACTCTTTTGCTAGATATGTGCATGCTCCTCCTCCTCTAAATTACCTTCTTGTCACTGCAACTATGCTGGGTGGGGCTTCAGCCATTGGTTCTTACACTGTAGGTTTGGTTGATGATGCTTTGGGTTCTGCAGCTTTCACAGCTCTAGCTGTTTTTGCCAGTGGAGCAGGTGCCCTTGTCATTGGCTTTCCCTTAGTGTTCATCCCTCTTCCACTTATATCTGGGTTTTATTTAGCACGATTCTTTACAAAGAAAAGTTTGCCCTCCTACTTTGCTTCTGTAACACTAGCCAGTCTCATGGTTTCATGGTTTGTTGTTCATAACTTTTGGGATCTCAATATTTGGATGGCTGGTATGAATTTGAAATCATTTTGTAAATTGATTCTTGGAAGTGCAATTCTTGCTATGGCCATTCCTGGTTTGGCTCTCTTTCCGCCAAAATTTGGATTCTTAACTGAACTTGGCCTAATTTGTTATGCTTTACTGCTATGCCATATAGAGAATCGGTTCTTCAACTTCACAAATATGTATTATTTTGGATTTGAGGATGATGTTATGTATCCAAGCTATATGGTCTTACTTACAACCATTCTAGGCTTTGCTTTAACAAGGAGGTTGGCGTCAGATCACCGAATTGGGCCCAAGGCTCAATGGATTTTGATTTGCCTATTTTCTTCAAAGTTGGCAATGTTATTTATTTCCTCAAAGTCAGTTATGTGGGTCGCAGCAGTTTTACTTTTGGCAGTTTCTCCACCTTTATTACTTTATAGGGATAGATTGAAAGGAGCTTCAAAGATGAAAATATGGCAAGCTTATGCTCATGCAATTGTAGTCGCTTTTTCTGCCTGGTTTTGTCGAGAAACAATATTTGAAGCTCTTCAATGGTGGAATGGAATGCCTCCATCAGATGGTTTGCTTTTGGGATCATATGTACTCTTAACAGGAATTGCTTGCATACCAATTGTTGCTTTTCATTTTTCCCATGCCCAGCAAGCAAAGAGGGTTTTAGTGCTTGCAATAGCCCTGGGCCTGCTGCTCGTTTTCTTGCAGCCTCCAATCCCTCTATCATGGGCATTTAGATCAGATTTAATCAAAGCCGCACACGAATCGACTGACGACTACTCCATATATGGATTTGTTGCCTCCAGGCCCGCATGGCCTTTTTGGCTGCTCATAGCTACAATACTTCTAACATTAGCAGCAGTTACAAACATCGTTCCCATCAAATATATTGTTGAGTTGAGAGCATTTTATGCCGTCGGGGTCGGGATAACCATCGGCGTGTATGTATGCGTGCAATACTTTTTTCAATCCACGTTCTTGTATCCCCTGCTTGTTGCTGCCATAGTCTGTGCCTCTGTCTTCGTAGTGTTCACCCACTTTCCATCAGCATCAAGCCCTAGAATCTTACCTTGGGTTTTTGCCCTCATGGTGACTCTCTTACCCGTTTCATACCTGATGGAAGGCCAGCTCAGAGCAAAGAGCGCCAGCAATGAAGACACTGAACCTGACATGTTCAGCACCTTGCTGGAAATTGAAGGCGCGAGGATGTCTCTCCTGGGGCTTTATGCCATGCTATTCATGCTTATATCTTTAGAGATCAAGTTTGAATTATCAACCCTAATGAGAGAGAAGGCTTTTGAAAGAGGTGTTGCTCCAAGCCCGTCTGGCTTTCCGTCAAAATCAAGGCTCATGCAACAGCGGAGGGCGTCCGCCGTGCCTGCCTTCACGATCAAGAGACTGGCGGCTGAGGCTTCTTGGATGCCTGCGGTCGGCAACGTGTCGACCGTCCTCTGCTTCAGCATATGCCTCATCATCAACATAAGCCTCGCTGATGGTTCAAACCTCGCGATACTCTTCCTTGCCCCTGTCCTCTTGCTCCTCAACCAAGATTCCGATATTCTTTCCGGTTTTGGGGACAGGCAGAGGTATTTTCCAGTGTCTCTGGCAATCTCCGTGTTCTTAGTTTTGAACGCCATTTATATGATCGGGGACGAGGCCTGGAACGCAGGCGACGGTTGGGGGCTTGAGATAGGCAGGCCTGGCTGGTTCTTTGCCGTTAAAAATGCTGCCCTCCTCGTCCTGACATTGCCCAATCACATCCTCTTCAACCGCTTCATGTGGGACTATGTTAAGCAGACCGACTCGATGCTGCTGCTGACCATGCCTCTTAACATACCGTCCATCCTCATAACGGATATTATGGCGGTAAGTATTCTAGGGTTTCTTGGCATCGTCTACTCTCTGGGTCAGTACCTGATATCCAGGAGGATAAGACTGGCTGGAATGAAGTATATTTGAAGCAGGCCTGTAGCTTTTTCCAGCCCCAGGCTCATTTTGCCGGTCGGTTTCTATGCAAAATTGCATGTAATGAGTGGTGGCAGATCTGTTAATTTTGTTTGAATTTTGAAGGGCAAGACTTTTAATGTGCTGCAGATAATTTTATAGCTTTTGTTACTCTTCTTTGTTTCCAACAGCCCATGTTTAGGGTACTCTTGTTGACAAAGAGACATTCCATTTCATCTTTTTTTTTTATCCATAATAAATTTATTTTAATGATGCAAGTGCTTCTGTTAAAGTGCTGGGATTTTTTTTTTAATCAATGGTCATATAAATATTTGTTGAAATAAATGTATGATCAATGAAATTTATAATCATAATGATTTTA

Network for GWHGAAEX016167

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX016167
MLFDESSLSRHSHHRAYISPMSAPLFPSFSGSGGGDSPSPLRPSPSSSTPSSSVSRIHTTPSFAYNARIALALVPAAAFLLDLGGVPVAVVLTIGLMVAYIFDSLRLKSAAFFAVWFSLIAAQLAFFASASSSLTASSSISSTPLIVLALLLCAETSFLIGIWASLQFRWIQIENPSIVTSLERLLFACIPVTTPAIFTWAVISALGMANAAYYFLAFACLFYWLYSLPCSSSFRSKNEPSADSQILGSLESCIHTLYLLFAPLLFHLASHYSTSFSSFSSICDLLLLFFIPFSFQLYASTRGALWWVTKNEVQIQRIRVVNGAVAMVVVVICLEIRVVFHSFARYVHAPPPLNYLLVTATMLGGASAIGSYTVGLVDDALGSAAFTALAVFASGAGALVIGFPLVFIPLPLISGFYLARFFTKKSLPSYFASVTLASLMVSWFVVHNFWDLNIWMAGMNLKSFCKLILGSAILAMAIPGLALFPPKFGFLTELGLICYALLLCHIENRFFNFTNMYYFGFEDDVMYPSYMVLLTTILGFALTRRLASDHRIGPKAQWILICLFSSKLAMLFISSKSVMWVAAVLLLAVSPPLLLYRDRLKGASKMKIWQAYAHAIVVAFSAWFCRETIFEALQWWNGMPPSDGLLLGSYVLLTGIACIPIVAFHFSHAQQAKRVLVLAIALGLLLVFLQPPIPLSWAFRSDLIKAAHESTDDYSIYGFVASRPAWPFWLLIATILLTLAAVTNIVPIKYIVELRAFYAVGVGITIGVYVCVQYFFQSTFLYPLLVAAIVCASVFVVFTHFPSASSPRILPWVFALMVTLLPVSYLMEGQLRAKSASNEDTEPDMFSTLLEIEGARMSLLGLYAMLFMLISLEIKFELSTLMREKAFERGVAPSPSGFPSKSRLMQQRRASAVPAFTIKRLAAEASWMPAVGNVSTVLCFSICLIINISLADGSNLAILFLAPVLLLLNQDSDILSGFGDRQRYFPVSLAISVFLVLNAIYMIGDEAWNAGDGWGLEIGRPGWFFAVKNAALLVLTLPNHILFNRFMWDYVKQTDSMLLLTMPLNIPSILITDIMAVSILGFLGIVYSLGQYLISRRIRLAGMKYI

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	24.660
SRP064423	SRR2545915	Juvenile tuber	31.490
SRP108465	SRR5643513	five period of Gastrodia elata	36.500
	SRR5643514	five period of Gastrodia elata	34.010
	SRR5643515	five period of Gastrodia elata	34.480
	SRR5643524	five period of Gastrodia elata	35.440
	SRR5643525	five period of Gastrodia elata	30.270
	SRR5643528	five period of Gastrodia elata	26.360
	SRR5643658	five period of Gastrodia elata	31.530
	SRR5643659	five period of Gastrodia elata	32.760
	SRR5643660	five period of Gastrodia elata	32.440
	SRR5643661	five period of Gastrodia elata	33.940
	SRR5643662	five period of Gastrodia elata	26.830
	SRR5643663	five period of Gastrodia elata	30.710
	SRR5643664	five period of Gastrodia elata	19.240
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	39.950
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	53.980
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	44.130
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	36.550
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	37.610
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	41.480
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	42.280
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	43.910
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	48.550
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	45.050
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	46.640
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	46.640
SRP279888	Gastro	Gastrodia elata tuber	22.03
	Juven	Juvenile tuber	36.59
	Mother_Gastro	Mother tuber of Gastrodia elata	30.08
	Mother_Juven	Mother tuber of Juvenile	36.83