Detail information of GWHGAAEX016171/evm.TU.scaffold_73.91


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007621955782196234+
Transcript Sequence

Network for GWHGAAEX016171

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07515HADHA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Fatty acid metabolismmap01212
Propanoate metabolismmap00640
Butanoate metabolismmap00650
Fatty acid elongationmap00062
Fatty acid degradationmap00071
Cysteine and methionine metabolismmap00270
Lysine degradationmap00310
Tryptophan metabolismmap00380
beta-Alanine metabolismmap00410
Aminobenzoate degradationmap00627
Caprolactam degradationmap00930

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.690
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.870
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.260
SRR5643664five period of Gastrodia elata0.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.430
SRR6049662Rhizomagastrodiae_C368-T01_good_11.630
SRR6049663Rhizomagastrodiae_C368-T01_good_10.640
SRR6049664Rhizomagastrodiae_C368-T10_good_10.620
SRR6049665Rhizomagastrodiae_C368-T10_good_10.620
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.46