Detail information of GWHGAAEX016184/evm.TU.scaffold_73.105


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521461076|ref|YP_008147805.1|1.00E-88hypothetical protein SCE1572_06750 [Sorangium cellulosum So0157-2]
KOGKOG14290dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase
nrgi|695065079|ref|XP_009421119.1|0PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SGE0|AXS2_ARATH0UDP-D-apiose/UDP-D-xylose synthase 2
trEMBLtr|M0RH96|M0RH96_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P11200_001}
TAIRAT1G082000UDP-D-apiose/UDP-D-xylose synthase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007623927832398504+
Transcript Sequence

Network for GWHGAAEX016184

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01370.20Epimerase172911.60E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12449AXS Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0050662Molecular Functioncoenzyme binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.300
SRR2545915Juvenile tuber31.490
SRP108465SRR5643513five period of Gastrodia elata48.900
SRR5643514five period of Gastrodia elata38.110
SRR5643515five period of Gastrodia elata53.250
SRR5643524five period of Gastrodia elata43.810
SRR5643525five period of Gastrodia elata72.210
SRR5643528five period of Gastrodia elata87.100
SRR5643658five period of Gastrodia elata84.660
SRR5643659five period of Gastrodia elata50.910
SRR5643660five period of Gastrodia elata43.240
SRR5643661five period of Gastrodia elata49.050
SRR5643662five period of Gastrodia elata33.060
SRR5643663five period of Gastrodia elata39.520
SRR5643664five period of Gastrodia elata20.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_145.280
SRR6049655Rhizomagastrodiae_C368-T10_good_147.900
SRR6049656Rhizomagastrodiae_C368-T07_good_155.080
SRR6049657Rhizomagastrodiae_C368-T07_good_136.800
SRR6049658Rhizomagastrodiae_C368-T04_good_139.710
SRR6049659Rhizomagastrodiae_C368-T04_good_133.960
SRR6049660Rhizomagastrodiae_C368-T01_good_130.370
SRR6049661Rhizomagastrodiae_C368-T04_good_153.940
SRR6049662Rhizomagastrodiae_C368-T01_good_173.180
SRR6049663Rhizomagastrodiae_C368-T01_good_146.690
SRR6049664Rhizomagastrodiae_C368-T10_good_156.930
SRR6049665Rhizomagastrodiae_C368-T10_good_156.930
SRP279888GastroGastrodia elata tuber 26.98
JuvenJuvenile tuber19.05
Mother_GastroMother tuber of Gastrodia elata 92.65
Mother_JuvenMother tuber of Juvenile 47.53