Detail information of GWHGAAEX016192/evm.TU.scaffold_73.113
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15892184|ref|NP_359898.1| | 5.00E-45 | ferredoxin [Rickettsia conorii str. Malish 7] |
| KOG | KOG3309 | 3.00E-77 | Ferredoxin |
| nr | gi|670416536|ref|XP_008649190.1| | 1.03E-84 | PREDICTED: adrenodoxin [Zea mays] |
| Swissprot | tr|Q8S904|MFDX2_ARATH | 1.00E-77 | Adrenodoxin-like protein 2, mitochondrial {ECO:0000303|PubMed:12714594} (Precursor) |
| trEMBL | tr|B6U5I8|B6U5I8_MAIZE | 4.00E-85 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM5G856338_P03} |
| TAIR | AT4G21090 | 3.00E-77 | MITOCHONDRIAL FERREDOXIN 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000076 | 2555912 | 2571982 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016192
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00111.26 | Fer2 | 72 | 153 | 2.80E-13 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009055 | Molecular Function | electron carrier activity |
| GO:0051537 | Molecular Function | 2 iron, 2 sulfur cluster binding |
| GO:0051536 | Molecular Function | iron-sulfur cluster binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 21.410 |
| SRR2545915 | Juvenile tuber | 20.900 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 16.070 |
| SRR5643514 | five period of Gastrodia elata | 15.400 | |
| SRR5643515 | five period of Gastrodia elata | 16.020 | |
| SRR5643524 | five period of Gastrodia elata | 16.580 | |
| SRR5643525 | five period of Gastrodia elata | 10.850 | |
| SRR5643528 | five period of Gastrodia elata | 11.110 | |
| SRR5643658 | five period of Gastrodia elata | 6.930 | |
| SRR5643659 | five period of Gastrodia elata | 23.580 | |
| SRR5643660 | five period of Gastrodia elata | 21.750 | |
| SRR5643661 | five period of Gastrodia elata | 20.280 | |
| SRR5643662 | five period of Gastrodia elata | 20.960 | |
| SRR5643663 | five period of Gastrodia elata | 22.430 | |
| SRR5643664 | five period of Gastrodia elata | 19.610 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.990 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.690 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 19.170 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 15.630 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.660 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.090 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 17.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 13.320 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 20.640 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 22.100 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.800 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.800 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 30.72 |
| Juven | Juvenile tuber | 19.70 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 13.15 | |
| Mother_Juven | Mother tuber of Juvenile | 19.98 |