Detail information of GWHGAAEX016196/evm.TU.scaffold_73.118


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672136147|ref|XP_008791759.1|2.95E-54PREDICTED: uncharacterized protein LOC103708559 isoform X1 [Phoenix dactylifera]
Swissprottr|Q9FGD1|RKD3_ARATH1.00E-13Protein RKD3
trEMBLtr|M0TV19|M0TV19_MUSAM7.00E-41Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P30670_001}
TAIRAT5G669904.00E-13RWP-RK domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007627043652730902+
Transcript Sequence

Network for GWHGAAEX016196

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02042.14RWP-RK681156.30E-23
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyRWP-RK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.270
SRP108465SRR5643513five period of Gastrodia elata2.230
SRR5643514five period of Gastrodia elata0.210
SRR5643515five period of Gastrodia elata2.590
SRR5643524five period of Gastrodia elata2.020
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata1.710
SRR5643658five period of Gastrodia elata0.430
SRR5643659five period of Gastrodia elata0.220
SRR5643660five period of Gastrodia elata0.500
SRR5643661five period of Gastrodia elata1.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.760
SRR5643664five period of Gastrodia elata0.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.790
SRR6049655Rhizomagastrodiae_C368-T10_good_10.680
SRR6049656Rhizomagastrodiae_C368-T07_good_11.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.680
SRR6049658Rhizomagastrodiae_C368-T04_good_13.310
SRR6049659Rhizomagastrodiae_C368-T04_good_10.970
SRR6049660Rhizomagastrodiae_C368-T01_good_10.490
SRR6049661Rhizomagastrodiae_C368-T04_good_12.090
SRR6049662Rhizomagastrodiae_C368-T01_good_11.580
SRR6049663Rhizomagastrodiae_C368-T01_good_10.220
SRR6049664Rhizomagastrodiae_C368-T10_good_11.650
SRR6049665Rhizomagastrodiae_C368-T10_good_11.650
SRP279888GastroGastrodia elata tuber 0.29
JuvenJuvenile tuber0.30
Mother_GastroMother tuber of Gastrodia elata 1.13
Mother_JuvenMother tuber of Juvenile 0.82