Detail information of GWHGAAEX016200/evm.TU.scaffold_73.123


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262193487|ref|YP_003264696.1|3.00E-34MATE efflux family protein [Haliangium ochraceum DSM 14365]
KOGKOG13470Uncharacterized membrane protein, predicted efflux pump
nrgi|672162179|ref|XP_008800923.1|0PREDICTED: MATE efflux family protein 5-like [Phoenix dactylifera]
Swissprottr|Q8RWF5|MATE9_ARATH2.00E-150MATE efflux family protein 9
trEMBLtr|M0SIS4|M0SIS4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P29080_001}
TAIRAT1G711400MATE efflux family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007628165722828451+
Transcript Sequence

Network for GWHGAAEX016200

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01554.17MatE341932.00E-31
PF01554.17MatE2554163.00E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015297Molecular Functionantiporter activity
GO:0042910Molecular Functionxenobiotic transporter activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.250
SRR2545915Juvenile tuber5.340
SRP108465SRR5643513five period of Gastrodia elata24.980
SRR5643514five period of Gastrodia elata34.560
SRR5643515five period of Gastrodia elata24.740
SRR5643524five period of Gastrodia elata23.840
SRR5643525five period of Gastrodia elata20.300
SRR5643528five period of Gastrodia elata22.680
SRR5643658five period of Gastrodia elata26.640
SRR5643659five period of Gastrodia elata13.340
SRR5643660five period of Gastrodia elata6.700
SRR5643661five period of Gastrodia elata7.920
SRR5643662five period of Gastrodia elata12.190
SRR5643663five period of Gastrodia elata19.640
SRR5643664five period of Gastrodia elata11.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_144.540
SRR6049655Rhizomagastrodiae_C368-T10_good_129.350
SRR6049656Rhizomagastrodiae_C368-T07_good_136.720
SRR6049657Rhizomagastrodiae_C368-T07_good_123.420
SRR6049658Rhizomagastrodiae_C368-T04_good_139.740
SRR6049659Rhizomagastrodiae_C368-T04_good_136.000
SRR6049660Rhizomagastrodiae_C368-T01_good_151.140
SRR6049661Rhizomagastrodiae_C368-T04_good_124.570
SRR6049662Rhizomagastrodiae_C368-T01_good_1110.170
SRR6049663Rhizomagastrodiae_C368-T01_good_1111.750
SRR6049664Rhizomagastrodiae_C368-T10_good_163.270
SRR6049665Rhizomagastrodiae_C368-T10_good_163.270
SRP279888GastroGastrodia elata tuber 11.86
JuvenJuvenile tuber13.04
Mother_GastroMother tuber of Gastrodia elata 19.55
Mother_JuvenMother tuber of Juvenile 6.84