Detail information of GWHGAAEX016209/evm.TU.scaffold_73.135


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|694998301|ref|XP_009403859.1|0PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SZL8|FRS5_ARATH3.00E-119Protein FAR1-RELATED SEQUENCE 5
trEMBLtr|I1NYD2|I1NYD2_ORYGL9.00E-162Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA02G0073800.1}
TAIRAT4G381801.00E-118FAR1-related sequence 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007631065243137825+
Transcript Sequence

Network for GWHGAAEX016209

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03101.14FAR1921764.30E-21
PF10551.8MULE2993925.70E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyFAR1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.620
SRR2545915Juvenile tuber20.240
SRP108465SRR5643513five period of Gastrodia elata12.610
SRR5643514five period of Gastrodia elata14.050
SRR5643515five period of Gastrodia elata14.830
SRR5643524five period of Gastrodia elata14.740
SRR5643525five period of Gastrodia elata13.820
SRR5643528five period of Gastrodia elata10.920
SRR5643658five period of Gastrodia elata14.010
SRR5643659five period of Gastrodia elata18.970
SRR5643660five period of Gastrodia elata19.040
SRR5643661five period of Gastrodia elata15.880
SRR5643662five period of Gastrodia elata15.760
SRR5643663five period of Gastrodia elata20.290
SRR5643664five period of Gastrodia elata18.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.560
SRR6049655Rhizomagastrodiae_C368-T10_good_115.550
SRR6049656Rhizomagastrodiae_C368-T07_good_119.410
SRR6049657Rhizomagastrodiae_C368-T07_good_125.970
SRR6049658Rhizomagastrodiae_C368-T04_good_122.310
SRR6049659Rhizomagastrodiae_C368-T04_good_124.730
SRR6049660Rhizomagastrodiae_C368-T01_good_122.520
SRR6049661Rhizomagastrodiae_C368-T04_good_120.960
SRR6049662Rhizomagastrodiae_C368-T01_good_114.220
SRR6049663Rhizomagastrodiae_C368-T01_good_116.690
SRR6049664Rhizomagastrodiae_C368-T10_good_113.440
SRR6049665Rhizomagastrodiae_C368-T10_good_113.440
SRP279888GastroGastrodia elata tuber 24.74
JuvenJuvenile tuber22.52
Mother_GastroMother tuber of Gastrodia elata 15.38
Mother_JuvenMother tuber of Juvenile 24.75