Gene detail

Detail information of GWHGAAEX016216/evm.TU.scaffold_73.143_evm.TU.scaffold_73.144

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|294507855\|ref\|YP_003571913.1\|	3.00E-32	lysophospholipase [Salinibacter ruber M8]
KOG	KOG1455	6.00E-154	Lysophospholipase
nr	gi\|743876102\|ref\|XP_010907497.1\|	0	PREDICTED: caffeoylshikimate esterase [Elaeis guineensis]
Swissprot	tr\|Q9C942\|CSE_ARATH	2.00E-51	Caffeoylshikimate esterase
trEMBL	tr\|I1HQI1\|I1HQI1_BRADI	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI2G46910.1}
TAIR	AT1G77420	6.00E-154	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000076	3328746	3365626	-

Transcript Sequence
>GWHTAAEX016216 CCTTTTCAGTTCACTCTCCTTCGTCTCTGTATTCGCCAAATGGCAATGTGCCTCGAATTACCACACAGCTGTTTCTCTCTTTCCCGCCGCTTGGAACTCAACGCTGGAGCTCCGACGAAACAACGTCGATCCGGGGATTTAATTCTTCAGGGCCTGAGGACGCCTGCTGTCGTCAATATCTCGGCTTCGAGGCGTGCAATCGAAGGCGTGGGCGAAGAGCTCAGCGCGGTGGCGTCACAGAGCCTTGACACGGCCGCCGCACGGAGGCGAGTTCGAGCAGCGTTTCTCAAAGTGCAGGGACGGCTTGATCACTTCCTCTTCAAGGCAGCTCCGTCGGATATAATGATGGAGGAGAGGTACGAGAGAAACTCCAAAGGAATGGAGATCTTTTGGAAGAGCTGGCTTCCGAACCTTGGTATTGCTACCAAGGCTACCCTCTTCTTTTGTCACGGTTACGGTGACACCTGCACTTTCTTTTTTGAAGGGATTGCAAAGAGGATAGCAGCAGCAGGATATGGAGTCTATGCCATGGATTTTCCTGGATTTGGTCTCTCACAGGGTTTGCATGGTTACATTCCCAGCTTTGATGAGATGGTAGACCATGTTATAGAGCAGTATGCTCATATTCGAGAGAGAAAGGAAGTTGCAGGGCTACGGCACTTTCTCTTAGGCGAATCTATGGGTGGTGCTGTGGCTCTCAAAGTTCATCTAAAGCAGCCGAAACAATGGGATGGCGTGTTGCTTGTGGCACCCATGTGTAAGATTGCAGAAGATGTGACACCGCCTGCCCCAATTTTGAGCGCACTATCTCTCCTGTCATATATTTTACCAGAGGCAAAGTTGTTTCCACAGAAGGATATTGGGGAGCTAGCATTCAAAGATCCAGTGAAAAGAAGAGTGGCTGAGTATAATGTAATCTCATATGTCGATCGAATGAGATTAAGAACAGCAGTTGAACTCATAAAGGCAACTCATGAAATTGAGTCAAAACTTGAGAAGGTTTCTGCTCCATTGCTGATCCTTCATGGAGCTGCTGACAAAGTGACAGATCCCAACGTGAGCAAGTTCCTTTATGAAAAGGCTTCGACGGACGATAAAACCCTAAAGTTTTATGACGGAGCACATCATGCCATCCTTGAGGGAGAATCCGACGAAACCATTTCTAGTGTCATTTGTGATATCGTCTCGTGGCTCGATTCCCGTGCCATATCCGGGGAGAGTGTCCAATGATATGTTGCCACATGGCTCTTAATGGAGCTCGAGAAAGATTCCGAAATTTGCTTATGTTTATGTGCTTGTCTCAAAGTTTTTAGCACTAAGTTTTTTTAAACATTATATACATTACAAATTTTCTATGCTAAGCAATACGATTTATATGTGTTTACTTGGACAATTTATTTGCTTGTGTTTGTATGTTATGTATTTGGTATTCTTACTTTGACTTGAGTAGCACATTTCCTT

Network for GWHGAAEX016216

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12146.7	Hydrolase_4	129	369	7.60E-58

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01054	MGLL	Metabolic pathways	map01100
		Glycerolipid metabolism	map00561
		Regulation of lipolysis in adipocytes	map04923
		Retrograde endocannabinoid signaling	map04723
		Thermogenesis	map04714

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.940
SRP064423	SRR2545915	Juvenile tuber	5.640
SRP108465	SRR5643513	five period of Gastrodia elata	12.270
	SRR5643514	five period of Gastrodia elata	18.460
	SRR5643515	five period of Gastrodia elata	14.180
	SRR5643524	five period of Gastrodia elata	16.540
	SRR5643525	five period of Gastrodia elata	4.710
	SRR5643528	five period of Gastrodia elata	4.680
	SRR5643658	five period of Gastrodia elata	4.120
	SRR5643659	five period of Gastrodia elata	7.530
	SRR5643660	five period of Gastrodia elata	8.050
	SRR5643661	five period of Gastrodia elata	5.020
	SRR5643662	five period of Gastrodia elata	9.810
	SRR5643663	five period of Gastrodia elata	7.820
	SRR5643664	five period of Gastrodia elata	10.280
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.860
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.110
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.410
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.690
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.870
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.470
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.830
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.710
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.810
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	18.400
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	18.400
SRP279888	Gastro	Gastrodia elata tuber	11.29
	Juven	Juvenile tuber	8.99
	Mother_Gastro	Mother tuber of Gastrodia elata	2.56
	Mother_Juven	Mother tuber of Juvenile	4.15