Gene detail

Detail information of GWHGAAEX016217/evm.TU.scaffold_73.146

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000076	3366706	3369331	-

Transcript Sequence
>GWHTAAEX016217 GGAAGATACTAATTATGTTTTGAAGTGTGGATCTGCAGCAAGGAAGGTGACAAGGTGGAGGAAGAACTAAGGATGATCGTCGAGTTGTTGGTGGAGAATCGCAAGAAGGCAGTAACCTTTCGAGCGGCGGCGGTCTAAACCCTAATCGCTCTGTTTGGTGTCGTGTCTTTGAAGGTGAACCGCATGACTCTCGAAGGTTGCTCGATTCAGCTGGCTTTGAAGGGATTCGAAGATTTTGCGGGTTCAAGTGTGTCTGGATTTCTGTTGAATGCTGTTCGGGAGAAAGATTCGGCGGATCAACATACTGACAACGAGCAAGAAATCCCGCGGCAAACAAGGCCGAAATGCTGATGAGCTTAGGAGCCAGGATCTGTTGAACAAAGGTTCGATTGGTATCCTAGATATTTCAAAAGTTTCTATTTTCTTGGTCCTGCGTATAGCTGATTCTGAAATTGTTGTGGTGAATTATATGTGCTGGAAAGAACAAACAGCTGCAGTCGAAACCCATTCTAATCATCCTAGAATAGCACCTGCCAGGTGCTCGCTCAAATGCCCCAAAGGAGATCCAAAACAGAAAAAAGCGAAGGCTCACTAATTGTCCGGTTGTTTGGGAGAAGAATTCCTTCGGCTGTGCTGCTCAATGAGCTCAAAATCAGATTGTTGACTTTGAAGAATTCAAAGTACACATTCTAGATAAGGATTGGTTTTTAGTGAAGTTTGCAGATGTTTCGTCCAAGACGGCCGAGTTGATGCAAGCTACAACCTTGATGCAAGTCGCCATGTGGAGGAACAGCTGCACGAATTGAGAGAATTTGAGTGAAAGAGGCGTAAGAGGTATTGGGAAAACAGTCTCATTCAACGTGCCATAACCAGAGATATGTGTGAGGTATATAGCTCACTGAATACAAGCATCCACCGTCCAAAGGGATTAATATAATGAATTGTGGAGATTCATTCAGTTACAACAAATAAACAAGAAGAGTAAAACAAGTAATTGCTAGTACGCCCCCTCAAGATCAGCTCCAGGAGTGATGATCATGCGAGCAATTATTTGAACCCACGAATCAGAAGGGGCTTGGAGATGATGCCTACAAGTTGTTGAGTGTTTGGAATGTGTCGGACTTTAATTTTGTGCGATTGGACAAGATCCCAAACAAAGTAAAAACAACTTTGATGTGCTTCGTGCACATGCATAGGATTGGCTTGGAGGTTAAGTATGTTTAGCCCAGATTGTCACAAAAGATGGCTGAGGCGGAATCTAGGGTGACGCCAATCTCAAGGAGAATGGACTGGATCCACATTGCTTCACTGGCTGCATTGGCAATGAATTTGTATTATGCTTCAGTGCTGGAACGAGAAACCGTTGTTGCTTCTTGGAGGATCATGAAATGAGATTGTTGCCGAGGGAAACAGAATATCAGGTGGATTTTCGATTCGACGCATCCCCAACCTAGTCGGCATCTCAGAATGTCGAGAGGGAGACAGTGGGCAGCAGTTGAAGGAGACTGCTGCAACGGGCTGTTTGCTGTAAATGGCGAAGGGTGCATTTGACTTCTGTCCAATCAGATTTGTAGGGCTATGCATGGATTGATAGACTATTGATGCTGAATGTGATGCCCAGTCTGCGATAAAGAGTGGGATCCGGAAAGGGGTTGTTGTCAGAATTTTCGGACTGCTTAGGGACAGTCATTGGAGTGATAGCTGGCTTGCAATGTTGCATATTTGCGGCACAAAGGAGTTCAGTTACAATATATTGCTGTGAGAGGAAGAGAGAGCTGTCATTGTAGGTCACGACAATGTTTTAGGAAATGGCGAATGGGTCCCAAGTCCTTGAGAGCAAATTGATTGAAGAGAGCTGCCACTAAATTGTAAATAATGACGGAATCATTTCCTGCGAGGAGAACATCATCCGCATATAAGAGGAGCAGCACATGAACTTTTGATTGGCAGAGAATGAAAAGAGAGGTGTCGTTGACTGCATTCCGAAAACCCAATGACGAGAGGACAACGGACAATTTTTGGTACCATTAGTGCGGGATTTCTTTAGTCCATAGAAAGCCTTATGCAGTTCAGACATGTTGTGGTTGTGCTAGAGATGAAACTTTGGGGGTAGTTGCATGTAAATATCTTCATGGATATTATCAAAGTTCAATTACCAAATGTACCATTTATGCGAGAGCGATGGAAATAACTACTCTGCTTGTGACCGCTTTGATGACGGGGCTGTCATAATAGTTGATTCTTTCTTGCTGCAACGAGACGAGCCTTGTGCTGGGCAATGGAACCATTGGGACTGAACTTCAATTTGTACAACCATTTGCAGCCAACAATATTTCCATTTTCCGAGCACGGCACAAGTGACCAAGTGCGGTTTTGCCGAAGAGCACGGAACTGATGCATGGAGTCAATCAAATGAGGATTGGTAGGAGCTTGTTTGAACGTAGTGGAAAAGTAGAGGAAGGGAGGAAAGTCATGGAATACACCTTGGGCTTTTAACTAAGTCATTTAATTTATATGATTACTTTAATTATTGATTATTATTTATTTTTTTTGACAATTACTATTAAATTAAGTAGTTTTGTAAAAGCTTTAATATTTTATGAGTAATATATAAAGGTTTGAGTGG

Network for GWHGAAEX016217

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.650
SRP064423	SRR2545915	Juvenile tuber	2.080
SRP108465	SRR5643513	five period of Gastrodia elata	3.580
	SRR5643514	five period of Gastrodia elata	3.340
	SRR5643515	five period of Gastrodia elata	3.210
	SRR5643524	five period of Gastrodia elata	3.460
	SRR5643525	five period of Gastrodia elata	1.280
	SRR5643528	five period of Gastrodia elata	0.910
	SRR5643658	five period of Gastrodia elata	0.380
	SRR5643659	five period of Gastrodia elata	4.130
	SRR5643660	five period of Gastrodia elata	3.610
	SRR5643661	five period of Gastrodia elata	4.130
	SRR5643662	five period of Gastrodia elata	4.290
	SRR5643663	five period of Gastrodia elata	3.620
	SRR5643664	five period of Gastrodia elata	3.520
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.210
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.840
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.200
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.370
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.110
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.760
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.520
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.400
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.260
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.240
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.240
SRP279888	Gastro	Gastrodia elata tuber	2.71
	Juven	Juvenile tuber	2.82
	Mother_Gastro	Mother tuber of Gastrodia elata	1.28
	Mother_Juven	Mother tuber of Juvenile	1.39