Detail information of GWHGAAEX016227/evm.TU.scaffold_73.159


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|119716210|ref|YP_923175.1|3.00E-27protein kinase [Nocardioides sp. JS614]
KOGKOG01985.00E-90MEKK and related serine/threonine protein kinases
nrgi|695035550|ref|XP_009405196.1|6.84E-104PREDICTED: mitogen-activated protein kinase kinase kinase A-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q40541|NPK1_TOBAC1.00E-48Mitogen-activated protein kinase kinase kinase NPK1
trEMBLtr|M0SNK1|M0SNK1_MUSAM1.00E-101Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P13360_001}
TAIRAT4G268905.00E-90mitogen-activated protein kinase kinase kinase 16

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007635597893561280-
Transcript Sequence

Network for GWHGAAEX016227

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase82533.10E-49
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilySTE_STE11

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.080
SRR2545915Juvenile tuber4.130
SRP108465SRR5643513five period of Gastrodia elata7.830
SRR5643514five period of Gastrodia elata4.820
SRR5643515five period of Gastrodia elata70.790
SRR5643524five period of Gastrodia elata7.450
SRR5643525five period of Gastrodia elata29.040
SRR5643528five period of Gastrodia elata109.440
SRR5643658five period of Gastrodia elata28.080
SRR5643659five period of Gastrodia elata47.670
SRR5643660five period of Gastrodia elata16.210
SRR5643661five period of Gastrodia elata40.760
SRR5643662five period of Gastrodia elata34.110
SRR5643663five period of Gastrodia elata13.010
SRR5643664five period of Gastrodia elata17.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.130
SRR6049655Rhizomagastrodiae_C368-T10_good_16.290
SRR6049656Rhizomagastrodiae_C368-T07_good_17.750
SRR6049657Rhizomagastrodiae_C368-T07_good_12.980
SRR6049658Rhizomagastrodiae_C368-T04_good_111.110
SRR6049659Rhizomagastrodiae_C368-T04_good_116.320
SRR6049660Rhizomagastrodiae_C368-T01_good_110.320
SRR6049661Rhizomagastrodiae_C368-T04_good_17.090
SRR6049662Rhizomagastrodiae_C368-T01_good_18.430
SRR6049663Rhizomagastrodiae_C368-T01_good_111.970
SRR6049664Rhizomagastrodiae_C368-T10_good_114.950
SRR6049665Rhizomagastrodiae_C368-T10_good_114.950
SRP279888GastroGastrodia elata tuber 2.06
JuvenJuvenile tuber0.27
Mother_GastroMother tuber of Gastrodia elata 134.42
Mother_JuvenMother tuber of Juvenile 25.98