Detail information of GWHGAAEX016229/evm.TU.scaffold_73.162


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|224082910|ref|XP_002306888.1|3.77E-38bZIP transcription factor family protein [Populus trichocarpa]
Swissprottr|P24068|OCS1_MAIZE3.00E-14Ocs element-binding factor 1
trEMBLtr|B9H4F3|B9H4F3_POPTR1.00E-38BZIP transcription factor family protein {ECO:0000313|EMBL:EEE93884.1}
TAIRAT1G753901.00E-27basic leucine-zipper 44

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007636478143649242-
Transcript Sequence

Network for GWHGAAEX016229

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_131755.60E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.970
SRR2545915Juvenile tuber24.320
SRP108465SRR5643513five period of Gastrodia elata5.450
SRR5643514five period of Gastrodia elata29.620
SRR5643515five period of Gastrodia elata23.310
SRR5643524five period of Gastrodia elata29.290
SRR5643525five period of Gastrodia elata87.120
SRR5643528five period of Gastrodia elata143.930
SRR5643658five period of Gastrodia elata135.150
SRR5643659five period of Gastrodia elata3.650
SRR5643660five period of Gastrodia elata7.540
SRR5643661five period of Gastrodia elata4.630
SRR5643662five period of Gastrodia elata22.470
SRR5643663five period of Gastrodia elata9.890
SRR5643664five period of Gastrodia elata15.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.870
SRR6049655Rhizomagastrodiae_C368-T10_good_13.750
SRR6049656Rhizomagastrodiae_C368-T07_good_17.300
SRR6049657Rhizomagastrodiae_C368-T07_good_15.390
SRR6049658Rhizomagastrodiae_C368-T04_good_114.440
SRR6049659Rhizomagastrodiae_C368-T04_good_114.790
SRR6049660Rhizomagastrodiae_C368-T01_good_110.750
SRR6049661Rhizomagastrodiae_C368-T04_good_111.450
SRR6049662Rhizomagastrodiae_C368-T01_good_123.190
SRR6049663Rhizomagastrodiae_C368-T01_good_129.460
SRR6049664Rhizomagastrodiae_C368-T10_good_16.970
SRR6049665Rhizomagastrodiae_C368-T10_good_16.970
SRP279888GastroGastrodia elata tuber 22.14
JuvenJuvenile tuber1.46
Mother_GastroMother tuber of Gastrodia elata 59.49
Mother_JuvenMother tuber of Juvenile 19.12