Gene detail

Detail information of GWHGAAEX016230/evm.TU.scaffold_73.163

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1471	Phosphatidylinositol transfer protein SEC14 and related proteins
nr	gi\|672123169\|ref\|XP_008784937.1\|	PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like [Phoenix dactylifera]
Swissprot	tr\|F4IHJ0\|SFH8_ARATH	Phosphatidylinositol/phosphatidylcholine transfer protein SFH8
trEMBL	tr\|A0A068VK65\|A0A068VK65_COFCA	Coffea canephora
TAIR	AT4G39170	Sec14p-like phosphatidylinositol transfer family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000076	3723493	3759431	+

Transcript Sequence
>GWHTAAEX016230 GTCTACCTAATCCAGTGCCCCATAATCTGTCTGCCTCTTTTATTCTTGCATTTATGCATTTTCTATTAGTCTAGGGTTCGAGCGCTTCTGGTTTCGACCTTGGAATTCCTGTGTCGCGGTAAAATGTCGGGGCCGCTCGATCGCTTCGCCAGGCCATGTTTCGAGGGAAGTTCTTGTCATGAAGGAAGAAAAGAACGCAAGTCTGACATTGAGAATTCAGGAGATGAGAGGAGAACGAAGATTGGATCTTTGAAGAAAAAGGCAATAAATGCCTCAACTAAATTTCGACATTCTTTGAGGAAAAAAGGCATTAAGAAAAGAAATGACAGTAGAGTCCTCTCTGTTTCAATTGAAGATGTGAGGGACGTTGAAGAGCTACAAGCTGTTGAAGAGTTTCGGCAATCCCTTTTAATGGACGATCCCTTTCCCACAAAGCTTGATGATTATCACATGATGTTGAGATTTCTTAAAGCAAGGAAGTTTGATATTGAGAAAGCAAAGCATATGTGGGCTGACATGGTTCAGTGGAGAAAGGAGTTTGGTGTTGAGAGTCTTGTTGAGGATTTTGTGTATGTTGAGTTAGATGAAGTTCTAAAATACTATCCACACGGTTATCATGGTGTGGATAAGGAGGGAAGACCAGTTTATATTGAAATGCTTGGCAAAGTTGATCCAAACAAACTCATGCAAGTGACAACCATGGAGCAATATTTAAAGTATCATGTCAAGGAGTTTGAGACATGTATTCAAGTCAAGTTTCCTGCATGCTCAATTGCTGCAAAAAGACACATAGACTCAAGTACAACAATCTTAGATGTTCAAGGCGTGGGTTTTAAGAACTTCAGCAAGAATGCTCGTGATTTAGTTATGCGTTTGCATAAAATTGATGGGGACAACTACCCCGAGACTCTGCATCAAATGTTCATCATCAATGCTGGTCCAGGTTTTAAACTACTTTGGAATAGTGTAAAGTCATTCCTTGATCCAAAAACGACCTCAAAAATTCATGTGCTTGGATCCAAATATCAGAATAAGCTTTTGGATATTATTGATTCCAGTGAATTGCCAGAAATTTTTGGCGGTTCTTGTACATGTGCTGATCAAGGTGGATGCATGAAGTCTGACAAGGGCCCATGGAAAGATCCTCAGATATTGAAGATGGTTCGTAGTGGTGAAGTGCACTGTGCTAGACAAATTGTCACCGTTTCCAACAGCGAGGGGAAAACAATTGCTTATGCCAAGCCACAGTACCCTAGAATAAAAGGCAGTGATACATCTACTGCAGAGTCTGGTTCAGATGCAGAATATGTAAATTCTCCTAAAATAACGAAGGATTATGCTTCTAATTCTCAGCTAACACCTTTGCGTGAAGAGGCCAAAATTATTCGTATAGCAACCCCATCAAACATTGATGATTGTGTTCCTATGGTTGATAAGACTGTAGATGTTGGATGGCGGAACAATATTTATAACAAGCAAAAGTTACCGCATCCACATGTTGGTCTTTCTCCCCCAGCTCACTTCCCAAAGTCTATTGGAGTAAGAGAGCGAGTTACAGCCTTTATTGTAGCTTTCTTTATGTCGGTTTTCACAGTGCTTCACTCATTAACCAATAGTGTGACCAACAAGCTTCCAGAGGGTTCTCCTGAACATGGTCACAGCTATTCTTTTTTACCACTAGTTAATATTCCAAAAGAGGAATTTCGGCTTCCTTCGCCAACTCCTGAATTCACAGATGCAGAGCTTCTTTCTTCTGTTACAAAAAGGCTTGGAGAACTTGAAGAAAAGGTTGAAACACTCCAGGCAAAGAGAGTTGTGATGCCTTATGAGAAAGAGGAGTTACTTGATGCTGCTGTACGCCGTGTGGATGCATTAGAAGCAGAGCTTATTGCTACTAAGAAGGCGTTGCATGAAGCTCTGATGAGGCAAGATGAGCTGCTGGCATACGTTGATCAAGAGCGGGAGGCTAAGCTCAGGCAATATAAAAAGAAGAAGTTTTTTTGCTGTTAAAAAAGGTTGGGCTGCTTGAGCATATCTGCCTCTTCTTGGAAATAAAGTCTATGGAGCGAGCAGAAATTGAGAGCTTGCTTTAGTGTGTGTGTGTATGTTGCTTTAGATTGTTAAATAATTTGTAGAGAAAATTAACTGCAGCAGTGTTTAGTTTCCACGATAACAGAGAGGTAACGGAGGGGAAAAGCATATCGGGTTTGTTTTGGTTTGAAAAAAGCTATTTGTATAAAATATATTGAACTTTAGCAAGTTAGCATTCTAGTTTTTTATTATCATAAATGCCGGCATGATATATGATGGCCTATATCTGTATCGTGTGCTGTGTGGCTAAAATGTGAGATATTTTTATTTTGTTAATTCTATGAATTTTTTTATATTATGTAACTGAGATTTCGAGATGTAAAATGCAATGTATTGCATATCTTTCTCCAATTTACAATTATGTCTGAGTTCGTT

Network for GWHGAAEX016230

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03765.14	CRAL_TRIO_N	107	131	1.90E-06
PF00650.19	CRAL_TRIO	155	321	1.60E-33

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	106.880
SRP064423	SRR2545915	Juvenile tuber	114.780
SRP108465	SRR5643513	five period of Gastrodia elata	65.910
	SRR5643514	five period of Gastrodia elata	57.450
	SRR5643515	five period of Gastrodia elata	55.960
	SRR5643524	five period of Gastrodia elata	60.270
	SRR5643525	five period of Gastrodia elata	70.120
	SRR5643528	five period of Gastrodia elata	76.380
	SRR5643658	five period of Gastrodia elata	76.050
	SRR5643659	five period of Gastrodia elata	60.040
	SRR5643660	five period of Gastrodia elata	62.750
	SRR5643661	five period of Gastrodia elata	56.950
	SRR5643662	five period of Gastrodia elata	61.960
	SRR5643663	five period of Gastrodia elata	56.740
	SRR5643664	five period of Gastrodia elata	60.600
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	83.990
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	57.400
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	83.510
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	102.740
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	116.450
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	137.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	97.480
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	116.160
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	80.350
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	94.460
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	72.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	72.080
SRP279888	Gastro	Gastrodia elata tuber	64.77
	Juven	Juvenile tuber	50.21
	Mother_Gastro	Mother tuber of Gastrodia elata	46.01
	Mother_Juven	Mother tuber of Juvenile	57.78