Detail information of GWHGAAEX016231/evm.TU.scaffold_73.164


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|158339337|ref|YP_001520514.1|3.00E-22ribose 5-phosphate isomerase B [Acaryochloris marina MBIC11017]
nrgi|672181728|ref|XP_008811092.1|3.40E-156PREDICTED: DNA-damage-repair/toleration protein DRT102 [Phoenix dactylifera]
Swissprottr|Q05212|DR102_ARATH3.00E-132DNA-damage-repair/toleration protein DRT102
trEMBLtr|W1PCB8|W1PCB8_AMBTC3.00E-139Uncharacterized protein {ECO:0000313|EMBL:ERN05349.1}
TAIRAT3G048804.00E-102DNA-damage-repair/toleration protein (DRT102)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007637598883761628+
Transcript Sequence

Network for GWHGAAEX016231

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02502.17LacAB_rpiB191468.90E-28
PF07883.10Cupin_22152721.90E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0016853Molecular Functionisomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms239.910
SRR2545915Juvenile tuber278.660
SRP108465SRR5643513five period of Gastrodia elata684.220
SRR5643514five period of Gastrodia elata831.210
SRR5643515five period of Gastrodia elata465.760
SRR5643524five period of Gastrodia elata581.630
SRR5643525five period of Gastrodia elata287.900
SRR5643528five period of Gastrodia elata293.410
SRR5643658five period of Gastrodia elata430.540
SRR5643659five period of Gastrodia elata269.760
SRR5643660five period of Gastrodia elata293.740
SRR5643661five period of Gastrodia elata295.910
SRR5643662five period of Gastrodia elata180.650
SRR5643663five period of Gastrodia elata245.820
SRR5643664five period of Gastrodia elata247.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1771.510
SRR6049655Rhizomagastrodiae_C368-T10_good_11349.470
SRR6049656Rhizomagastrodiae_C368-T07_good_1921.570
SRR6049657Rhizomagastrodiae_C368-T07_good_1603.470
SRR6049658Rhizomagastrodiae_C368-T04_good_1470.090
SRR6049659Rhizomagastrodiae_C368-T04_good_1455.040
SRR6049660Rhizomagastrodiae_C368-T01_good_1552.950
SRR6049661Rhizomagastrodiae_C368-T04_good_1479.930
SRR6049662Rhizomagastrodiae_C368-T01_good_1756.420
SRR6049663Rhizomagastrodiae_C368-T01_good_1692.690
SRR6049664Rhizomagastrodiae_C368-T10_good_11305.400
SRR6049665Rhizomagastrodiae_C368-T10_good_11305.400
SRP279888GastroGastrodia elata tuber 151.56
JuvenJuvenile tuber298.62
Mother_GastroMother tuber of Gastrodia elata 113.34
Mother_JuvenMother tuber of Juvenile 116.50