Gene detail

Detail information of GWHGAAEX016232/evm.TU.scaffold_73.165

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1623	9.00E-89	Multitransmembrane protein
nr	gi\|672138146\|ref\|XP_008792820.1\|	6.67E-124	PREDICTED: bidirectional sugar transporter SWEET2a-like [Phoenix dactylifera]
Swissprot	tr\|Q5JJY5\|SWT2A_ORYSJ	1.00E-115	Bidirectional sugar transporter SWEET2a (Precursor)
trEMBL	tr\|M0S2Y6\|M0S2Y6_MUSAM	2.00E-123	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P25290_001}
TAIR	AT3G14770	9.00E-89	Nodulin MtN3 family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000076	3764472	3774912	-

Transcript Sequence
>GWHTAAEX016232 TTAATTGATAAAATCCAATGGATACCATATTCTATTAGAATTAATCGAGCAGCCGCAAGATAAGGATTGTGGAATAGAAAGATGGGGCTTAGTTCCAAAACGAAGATGCGAGCTTGAGCAGAGTGACGGCGAGAATACGATATTGGATCCGTATTTTAAAGCAAGAAAGTGAACTGCTGATGGCTTCTTCGACGATTTGGACGGCCGGCGGGCCTTCTTTTTACAATATCTGCACTTTTTCTGCCGGTTGTGCAGGGAATCTTTGTGCCTTTGTGCTCTTCTTGTCGCCAATACCTACTTTCAGAAGAATTGTTCGGAATCGATCTACAGAGCAGTTCTCAGGGCTGCCCTATGTGTACGCCCTTCTGAACTGTTTGATTTGCTTCTGGTACGGGTTACCCTTTGTCTCCTATGGAGTTGTTTTGGTGGCTACAGTCAACTCTATTGGGGCAATTTTCCAGCTGGTTTACATCGCCCTTTTCATCACATTTGTGGATAGTGTTAGAAGGCTTAAAATTTGTGGATTGCTGATAGGCGTTTTTGCGATTTTTGGTATGGTAATTTATGTTAGTCTTGAGATGTTAGACCACCAAACTCGGCAGGTCTTTATCGGATATCTCAGCGTTGCATCCCTTATTTCCATGTTTGCTTCCCCTTTATTTATCATTAATTTAGTGGTTCGGACAAAGAGCGTTGAGTTCATGCCATTCCATTTATCACTTGCAACATTCCTTATGAGCATATCATTCTTTGCTTATGGGCTGCTGCTGCATGACTTCTTCATATATTTTCCAAATGGAATTGGGACTGTCTTGGGGGTCACACAATTACTATTGTATGCCTTTTACAGCAAGAGATCAAGGGAAGAATCTGCAGTACCGTTATTTGTCTCTTAATTTAGGATTTCCATAGCAAGTTTAGACTGGCATTCTGCTTTTTTCTTGAATTGTGTATTGTTTTATATTTTTTATTTTTTTTTGTTTTGCTGGTTGATGTAGAGTAGCTGAAAATGGGAAAATTTCTAGTTGTGTTCATTTCTGTCATGTCGCAAATCTTAAATAAGATCAAATGTTTGTTCATATTATTATGTGTGCTATCATTGTTCTTTCTGGTTTACCGAAAGTGGAACAAACTAGCAGGACATAGTTCTTATTTAATGTAAATATTCACTTATTCAATCCGTTGCTTGAAATAAAGCTAATTTTAAATGTTAAGCTTTTTGAGGTCAAATGCTGTTCGTTTGTAGGTTTTCCAAAGATTGATGATTTTTGAGATAAGTTTAGAATGTGCATTTCTATTGATTGCTTCTCATAATGGTCACTAAATACTTCGGTTCAAACTTAACTTAGGAATTGGCTAAGTTATATAGTTAAAGTTGATCAATCTAAACTAAGCAGAGATGAGGCACTAAACAAGTTAAGCTTTTTTGTAAAAAAAGATAAGCTGGCTCAATTTTATGAACCATTTGATTCAAACTGACTTTAGCTTGGCTTTTGAGCCTGAACAAAGCATGCCTTAAGTGCTGCTGCCTTTACGGAATCATATTTTTTTATGTTTCGCCATGCTTTTCAGAGTCTCGTAGTTATTAATGTATGATGAATGGTTGCTACTTCATTGAATTCTAGGTTCAGTAAAAGATGCATGTGATGTCTACTTATCGATAAATCATTTTGCAGATGTTAAATTGAAGTATTAGAAAAATCAGTGTAAGATGTGGAGGAAGTTAATGCAAGCTGGGAACAGAAGTGTTACTCCTTTTTTTCAATTGTTTTAAAACACTATTTTATAAGCTCCTAAGCGGAATAGATTTGACTATGTTGAGAAAGTTGGTCAGATGATGTTGTTTAAAGCAAGTTTCTCTGCATGACAAAATACTTGGTGAAGGAAGGAATCTTCTGCTGCTCCCTATAGCCAAGTGTTGCAAAAGTAGTAAAGGCTTCTATGCCTAGGAAGTACTCTGAGGAGTAGATTGTTGGAAGAGAAGGACTTTCGAAGAGTATCCATGGGGTCACCAAGCTACAAATTGAATTGCAACAAGAAAGAAAGTGAGAAATTGCGGTCTCTAAACCACAATGCACAGTTTGCAGTATTCATCATCTCAAGCATCATAAGGTCACATCCTTGTAATCTTTGAGGCCGCATGTCCACAAGCACACTTGTTATTTTTGAATTTCAACTAGAACAATCATTGGGTCACATCCTTATTGTTGTAAGGCCCTCATGCCCACAAGCATCCTGACTATTTCTAAAATTTAACTAGCTCAACC

Network for GWHGAAEX016232

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03083.15	MtN3_slv	23	105	2.60E-16
PF03083.15	MtN3_slv	143	227	1.60E-22

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.990
SRP064423	SRR2545915	Juvenile tuber	6.160
SRP108465	SRR5643513	five period of Gastrodia elata	11.640
	SRR5643514	five period of Gastrodia elata	11.140
	SRR5643515	five period of Gastrodia elata	10.310
	SRR5643524	five period of Gastrodia elata	9.790
	SRR5643525	five period of Gastrodia elata	6.450
	SRR5643528	five period of Gastrodia elata	5.250
	SRR5643658	five period of Gastrodia elata	7.330
	SRR5643659	five period of Gastrodia elata	8.050
	SRR5643660	five period of Gastrodia elata	6.370
	SRR5643661	five period of Gastrodia elata	6.810
	SRR5643662	five period of Gastrodia elata	8.090
	SRR5643663	five period of Gastrodia elata	6.940
	SRR5643664	five period of Gastrodia elata	7.360
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.960
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.940
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.630
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	15.420
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.510
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	29.360
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	16.670
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	20.320
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.010
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.480
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.460
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.460
SRP279888	Gastro	Gastrodia elata tuber	10.64
	Juven	Juvenile tuber	8.16
	Mother_Gastro	Mother tuber of Gastrodia elata	22.51
	Mother_Juven	Mother tuber of Juvenile	8.21