Detail information of GWHGAAEX016239/evm.TU.scaffold_73.173


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|289595703|ref|YP_003482399.1|3.00E-16DNA-binding TFAR19-related protein [Aciduliprofundum boonei T469]
KOGKOG34313.00E-59Apoptosis-related protein/predicted DNA-binding protein
nrgi|743757727|ref|XP_010923360.1|1.35E-67PREDICTED: DNA-binding protein DDB_G0278111-like [Elaeis guineensis]
trEMBLtr|W9RM62|W9RM62_9ROSA4.00E-65Programmed cell death protein 5 {ECO:0000313|EMBL:EXB86570.1}
TAIRAT1G298503.00E-59double-stranded DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007638633643878481-
Transcript Sequence

Network for GWHGAAEX016239

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01984.19dsDNA_bind151262.00E-29
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms167.550
SRR2545915Juvenile tuber104.360
SRP108465SRR5643513five period of Gastrodia elata116.110
SRR5643514five period of Gastrodia elata125.320
SRR5643515five period of Gastrodia elata112.580
SRR5643524five period of Gastrodia elata120.070
SRR5643525five period of Gastrodia elata229.320
SRR5643528five period of Gastrodia elata193.850
SRR5643658five period of Gastrodia elata241.350
SRR5643659five period of Gastrodia elata110.930
SRR5643660five period of Gastrodia elata129.290
SRR5643661five period of Gastrodia elata123.150
SRR5643662five period of Gastrodia elata131.440
SRR5643663five period of Gastrodia elata116.310
SRR5643664five period of Gastrodia elata137.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_197.630
SRR6049655Rhizomagastrodiae_C368-T10_good_1141.760
SRR6049656Rhizomagastrodiae_C368-T07_good_179.690
SRR6049657Rhizomagastrodiae_C368-T07_good_1103.460
SRR6049658Rhizomagastrodiae_C368-T04_good_177.510
SRR6049659Rhizomagastrodiae_C368-T04_good_175.210
SRR6049660Rhizomagastrodiae_C368-T01_good_175.470
SRR6049661Rhizomagastrodiae_C368-T04_good_164.880
SRR6049662Rhizomagastrodiae_C368-T01_good_165.780
SRR6049663Rhizomagastrodiae_C368-T01_good_163.930
SRR6049664Rhizomagastrodiae_C368-T10_good_1108.880
SRR6049665Rhizomagastrodiae_C368-T10_good_1108.880
SRP279888GastroGastrodia elata tuber 118.29
JuvenJuvenile tuber108.70
Mother_GastroMother tuber of Gastrodia elata 141.02
Mother_JuvenMother tuber of Juvenile 117.95