Gene detail

Detail information of GWHGAAEX016246/evm.TU.scaffold_73.181

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672135634\|ref\|XP_008791488.1\|	PREDICTED: uncharacterized protein LOC103708367 [Phoenix dactylifera]
trEMBL	tr\|F6I683\|F6I683_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB62479.1}
TAIR	AT4G01210	glycosyl transferase family 1 protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000076	4046067	4097679	+

Transcript Sequence
>GWHTAAEX016246 GCGCTCTCTTCAAATCATAGCATTTTGTATTCTATTGCTTTGGACTCTCACTACGACAAGCTTCTTACTAGAAATGGCGGATTTCCGTATTGTTTTCTCGTTTGTAACGATATAAGAAACGGTGAGAGAGTTTGTTCGTTGCAGGTCTCCTCTACCTCTTCTATCGCCTCCGTGATCTTCTTTACCTGATGGGATCTCTTGAAAATAACGCCTCCCTGAAGCGAACCATGCTTCCCCGCTCTTCTTCTTACCCGGGCGCTGGCGGCACCACCCGTTCGTTCTTCCACCGGCCGAAATCCAGGCTCTTCCGCTTTCTCTTTTTCGAGAAGTTCGATTACTTCCAATGGTTTCTTACTGCTGCGGCGTTTTTCGTCGTTGTCATTCTCTTCCAGTCCTTCCTTCCCGGTTCCGTTCCAGCTAAATCTCTTACCAGAGGCGTTCTTGACGGAGGCCACGTTTCTATGCCGGGTGGTTTTCGGGATTTGGACTTCGGGGAGGGAATTCGGTTTGTGCCGGCTAGGCTTCTGGAGAGGATCGAGAGGGAGGGAAATGAAACGGATTCGGTTTTAATTAATTTGGGGAGGCCAATAAAGCGCGCGGGGATTAGAAAGCCCCGTCTGGCCCTTATAGTCGGAGGCTTTTCACCAGACGCCATGCAGCTGCAAATGATCAGCATTGCCGCTGCTTTGAAGGCGGTTGGATACGAGATAGAGGTCATTTCATTCAAAGATGGCCCTATGCATGGAGCCTGGAGAAATGTGGGGATTTGCTTAACTATACTGCCAAAGCACATGCAGCAAGAAAGCACTATCGATTGGCTAGACTACAATGGCATACTTGTGAGTTCTGCTGGGGCCATGCTTGCTCTTTCACGTCTTTTGCAGGAGCCATTCAAATCTGTACCTGTCATATGGACCATAAATGATATGTCTCTGGCTGTTCGTTTTAGTCAATATATTAAAAAAGGTCAGACTGAATTTCTCAATTACTGGAAGCTAGTTTTTAGCAGAGCTACTGCTGTCGTATTCACGAACTACTTTTTACCGATCACTTATTTAACATTTGACACGGGCAACTATTTTGTTATCCCAAGCTCTGCTGTTGAGGCATGGGAAGCAGTTAGTTTTTTTAACTTAAATAATCTAACCGATTTGCGAGTTACTATGGGCTATAAGTCGGAGGAGTTTCTCATTGCTGTTGTGGGCAGTCAATTTGAATACAGTGGCATGTGGATGGAGCATGCACTTGTTTTACAAGGATTGGCACCACTTGCCCTTGAATTTTCTGATGGCAATTATTCTTCTCTGCTTAAAGTGGGAATATTATCAGGAAACTCAAGTAGCACATATAGAATGGCGCTGGAGGCTGTTGCTTTAAACTTAGGTTATCCAAGTGGCATTGTGCAGCAGATTACTGCCAATGGTGAGTACAATTTCCTTAGTATAGCAAACCTTGTGATATATGGGTCCTTTCTGGAGGAGCAAACTTTTCCGTCAGCTTTGTTGCATGCTATGAATCTTGAAAAGTTGGTTGTTGCTCCGGACCTTGACATCGTTAAAAGATATGTGGTTGATGGGGTGAATGGTTTTCTTTATCCCAAGGATAAGATTTGCAAGTTAACACAAGTTATACGCCAGGCCGTCTCACGGGCAAAATTATTTTCTCTAAATCCACATGTTGCGCCGCCTGGTCCTAGGAAGGCTCAAAATCTAATGGTTGCTGAAACTATTCAAGGCTATTTATGGTTACTTGAAAAAATAGTTAAGCTTCCATCCGAATTTTTTTCGCCAAAGACAGTTGCAGATTTGCCTAAAATGCTGAAAGAGGAATGGCAGTGGCGTCTATTTTATAATTTGGAAGATATGAATGACAGAAATAAAGCTCCCCAAATATTTGAAATTTTGGATGAGCTAGAAGAAAAGCTAAATCAAACAAGAGTGAACTTTAATGCTTATACCGTCTCTGCTTTTGGTGAGCAATTCTCCACCATAAACTGGAATGAAGAAGAAATAGCTCAAAAACTAAATGCTAGAAAAAGGATAGAAGAAGAAGTGTTGAAGGAAAGAAGTGATCAGTTTCATGGAACATGGGAGGAAATATATCGCAGTGCAAAAAGAGCTGATAGGGCAAAAAATGAGCTGCATGAGAGGGATGAGAAGGAACTTGAGCGAACAGGCCAGCCTTTGTGTATATATGAGCCTTATTTTGGGGAAGGAACATGGCCTTTTTTGCATAATTATTCACTGTACCGTGGAATTTCTTTGTCTTCCAAGGGGCGTAGACCTGGAGGTGATGATATAGATGCCAATTCTCGTCTTCCCATTCTTGGTAATGCCTATTACCGTGACGCTTTAAGTGAATATGGAGCATTTTTTGTTTTAGCTAACAACATTGATAGAATACACAAGAATGCTTGGATTGGGTTTCAGTCATGGAGAGCTAGGGCTAGGAAGGCATGCTTAAGTAAGAAGGCTGAGAAGGCACTCGTTGAATCCATTCAGACGCAAAAACATGGAGATGCATTTTACTTCTGGGTTCGCATGGATGAAGATTCAAGGAACCCTCTACACCAAGATTTTTGGTTTTTCTGCGACACAATTAACTCTGGAAATTGCAGGTTTACATTTTCTGAGGCACTTCGGAGGATGTACCGTGCACCAGAAGTTTGGGATTCCTTGCCTCAAATGCCTCAAGATGGGGGTACTTGGTCTGTTATGCACAGTTGGGTATTACCTACAAGATCCTTTCTTGAGTTTGTCATGTTTTCAAGAATGTTTGTAGATGCCTTGGACACAATTATGTTTGAGGAGCACCATCGAAGTGGCTATTGCTATTTGAGCCTAGCTAAGGATAGGCACTGCTATTCCCGAGTCCTGGAGCTGCTCGTGAACGTGTGGGCGTACCACAGCGCGCGGCGAATTGTGTACGTGGATCCGGAGACAGGTGCCATGCAAGAGCAGCATGGCCTCGGCCGCAGGAGGGGCAAGATGTGGGTCAAGTGGTTTTCACTCTCGACGCTCAAGAGCATGGACGAGGATTTGGCTGAGGAGTGGGATACAGAGCACCCCATCCGCCGGTGGCTGTGGCCATCAACCGGCGAAGTTTTCTGGCGTGGCATCCAGGAGAGGGAGCGGAACATGCGTCACCAGCTGAGGGAGAGGCGCCGCCAGCACAGCAGGGACAAGCTCCGCAGAATGCGCGGCCGCGTGCACCAGAAATCCCTAGGCAAGTACATCCGGCCACCGCCTGAGAACATGACTCTGCCGAATGATACTTCTGTGCTCTGAAGAAGCCTCTAATCACTTCAATTAATATTTCTTCTTTATCATATGTAGATGACATGTTGGTGATTGGTCAGGTTGTATAGTAATCAGATTAATGCTTGAAGGAGTTAGCCAAATCTCTTGCAATGATGGCATTTTTTAGCATGAAAATAGCTCACTTTTTTCTGGCATTGCATCTATTGATTTCACTCGCATTTTTTTGGTGCTTGTGATAATTTATTAGGACCAACAGCTGTAATTTAAGTTGTTCTGTGTTGACTCATTAAGTCAACAAACCAGGTTGTCAAGCTCCAGTATTAAAGAGACTTCTTGTGCTCGAGCTCGATAATGGGTTCACAAGCTGGCTTAATTAGCTAACAATGCATGAAGCTCACCAGAAAAGAACCCGTAGTTGATTCCTTTTGTGTGATTGTGAATGCATTAGCTTGTCTAAAGTTTAATCAATCACAACAATCTTGGCAGTAGTGCATCCTTAAGGCCAAGAGTAGAAAAATGCCATACTTGTACTATCATATATATCGTTATATACATTGCCAATGAA

Network for GWHGAAEX016246

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX016246
MGSLENNASLKRTMLPRSSSYPGAGGTTRSFFHRPKSRLFRFLFFEKFDYFQWFLTAAAFFVVVILFQSFLPGSVPAKSLTRGVLDGGHVSMPGGFRDLDFGEGIRFVPARLLERIEREGNETDSVLINLGRPIKRAGIRKPRLALIVGGFSPDAMQLQMISIAAALKAVGYEIEVISFKDGPMHGAWRNVGICLTILPKHMQQESTIDWLDYNGILVSSAGAMLALSRLLQEPFKSVPVIWTINDMSLAVRFSQYIKKGQTEFLNYWKLVFSRATAVVFTNYFLPITYLTFDTGNYFVIPSSAVEAWEAVSFFNLNNLTDLRVTMGYKSEEFLIAVVGSQFEYSGMWMEHALVLQGLAPLALEFSDGNYSSLLKVGILSGNSSSTYRMALEAVALNLGYPSGIVQQITANGEYNFLSIANLVIYGSFLEEQTFPSALLHAMNLEKLVVAPDLDIVKRYVVDGVNGFLYPKDKICKLTQVIRQAVSRAKLFSLNPHVAPPGPRKAQNLMVAETIQGYLWLLEKIVKLPSEFFSPKTVADLPKMLKEEWQWRLFYNLEDMNDRNKAPQIFEILDELEEKLNQTRVNFNAYTVSAFGEQFSTINWNEEEIAQKLNARKRIEEEVLKERSDQFHGTWEEIYRSAKRADRAKNELHERDEKELERTGQPLCIYEPYFGEGTWPFLHNYSLYRGISLSSKGRRPGGDDIDANSRLPILGNAYYRDALSEYGAFFVLANNIDRIHKNAWIGFQSWRARARKACLSKKAEKALVESIQTQKHGDAFYFWVRMDEDSRNPLHQDFWFFCDTINSGNCRFTFSEALRRMYRAPEVWDSLPQMPQDGGTWSVMHSWVLPTRSFLEFVMFSRMFVDALDTIMFEEHHRSGYCYLSLAKDRHCYSRVLELLVNVWAYHSARRIVYVDPETGAMQEQHGLGRRRGKMWVKWFSLSTLKSMDEDLAEEWDTEHPIRRWLWPSTGEVFWRGIQERERNMRHQLRERRRQHSRDKLRRMRGRVHQKSLGKYIRPPPENMTLPNDTSVL

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GTnc

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.240
SRP064423	SRR2545915	Juvenile tuber	11.010
SRP108465	SRR5643513	five period of Gastrodia elata	12.670
	SRR5643514	five period of Gastrodia elata	10.670
	SRR5643515	five period of Gastrodia elata	10.040
	SRR5643524	five period of Gastrodia elata	9.580
	SRR5643525	five period of Gastrodia elata	11.970
	SRR5643528	five period of Gastrodia elata	12.100
	SRR5643658	five period of Gastrodia elata	11.330
	SRR5643659	five period of Gastrodia elata	6.630
	SRR5643660	five period of Gastrodia elata	7.560
	SRR5643661	five period of Gastrodia elata	6.600
	SRR5643662	five period of Gastrodia elata	6.400
	SRR5643663	five period of Gastrodia elata	7.760
	SRR5643664	five period of Gastrodia elata	9.110
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.150
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.220
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.570
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.880
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.100
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	16.530
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.020
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.290
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.030
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.750
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	18.100
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	18.100
SRP279888	Gastro	Gastrodia elata tuber	8.93
	Juven	Juvenile tuber	11.41
	Mother_Gastro	Mother tuber of Gastrodia elata	19.30
	Mother_Juven	Mother tuber of Juvenile	13.78