Detail information of GWHGAAEX016260/evm.TU.scaffold_73.196


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719981502|ref|XP_010250145.1|0PREDICTED: glucan endo-1,3-beta-glucosidase 14-like [Nelumbo nucifera]
Swissprottr|Q9ZQG9|E1314_ARATH4.00E-106Glucan endo-1,3-beta-glucosidase 14 (Precursor)
trEMBLtr|D7U130|D7U130_VITVI5.00E-176Putative uncharacterized protein {ECO:0000313|EMBL:CBI36326.3}
TAIRAT2G266007.00E-163Glycosyl hydrolase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007645258004536425+
Transcript Sequence

Network for GWHGAAEX016260

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00332.17Glyco_hydro_17313475.30E-88
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH17

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.640
SRR2545915Juvenile tuber12.860
SRP108465SRR5643513five period of Gastrodia elata13.960
SRR5643514five period of Gastrodia elata14.840
SRR5643515five period of Gastrodia elata22.240
SRR5643524five period of Gastrodia elata17.790
SRR5643525five period of Gastrodia elata18.990
SRR5643528five period of Gastrodia elata23.440
SRR5643658five period of Gastrodia elata18.150
SRR5643659five period of Gastrodia elata15.630
SRR5643660five period of Gastrodia elata13.530
SRR5643661five period of Gastrodia elata17.480
SRR5643662five period of Gastrodia elata16.890
SRR5643663five period of Gastrodia elata14.290
SRR5643664five period of Gastrodia elata15.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.660
SRR6049655Rhizomagastrodiae_C368-T10_good_113.600
SRR6049656Rhizomagastrodiae_C368-T07_good_112.480
SRR6049657Rhizomagastrodiae_C368-T07_good_111.330
SRR6049658Rhizomagastrodiae_C368-T04_good_110.640
SRR6049659Rhizomagastrodiae_C368-T04_good_111.000
SRR6049660Rhizomagastrodiae_C368-T01_good_113.040
SRR6049661Rhizomagastrodiae_C368-T04_good_113.640
SRR6049662Rhizomagastrodiae_C368-T01_good_113.140
SRR6049663Rhizomagastrodiae_C368-T01_good_115.240
SRR6049664Rhizomagastrodiae_C368-T10_good_115.120
SRR6049665Rhizomagastrodiae_C368-T10_good_115.120
SRP279888GastroGastrodia elata tuber 11.09
JuvenJuvenile tuber10.93
Mother_GastroMother tuber of Gastrodia elata 26.16
Mother_JuvenMother tuber of Juvenile 17.73