Detail information of GWHGAAEX016269/evm.TU.scaffold_73.205


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG45479.00E-42WD40 repeat-containing protein
nrgi|672180462|ref|XP_008810425.1|2.70E-69PREDICTED: WD repeat-containing protein 43 [Phoenix dactylifera]
trEMBLtr|M0T3A1|M0T3A1_MUSAM6.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P01530_001}
TAIRAT1G154259.00E-42Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007647508214760040-
Transcript Sequence

Network for GWHGAAEX016269

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04003.11Utp121012032.40E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14546UTP5, WDR43 Ribosome biogenesis in eukaryotes map03008

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.550
SRR2545915Juvenile tuber26.810
SRP108465SRR5643513five period of Gastrodia elata39.610
SRR5643514five period of Gastrodia elata36.060
SRR5643515five period of Gastrodia elata34.810
SRR5643524five period of Gastrodia elata34.740
SRR5643525five period of Gastrodia elata21.450
SRR5643528five period of Gastrodia elata22.670
SRR5643658five period of Gastrodia elata17.300
SRR5643659five period of Gastrodia elata32.770
SRR5643660five period of Gastrodia elata35.690
SRR5643661five period of Gastrodia elata35.370
SRR5643662five period of Gastrodia elata41.630
SRR5643663five period of Gastrodia elata34.550
SRR5643664five period of Gastrodia elata32.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.190
SRR6049655Rhizomagastrodiae_C368-T10_good_137.250
SRR6049656Rhizomagastrodiae_C368-T07_good_123.760
SRR6049657Rhizomagastrodiae_C368-T07_good_129.430
SRR6049658Rhizomagastrodiae_C368-T04_good_115.890
SRR6049659Rhizomagastrodiae_C368-T04_good_112.660
SRR6049660Rhizomagastrodiae_C368-T01_good_120.090
SRR6049661Rhizomagastrodiae_C368-T04_good_114.240
SRR6049662Rhizomagastrodiae_C368-T01_good_120.130
SRR6049663Rhizomagastrodiae_C368-T01_good_115.590
SRR6049664Rhizomagastrodiae_C368-T10_good_132.660
SRR6049665Rhizomagastrodiae_C368-T10_good_132.660
SRP279888GastroGastrodia elata tuber 38.67
JuvenJuvenile tuber38.54
Mother_GastroMother tuber of Gastrodia elata 24.34
Mother_JuvenMother tuber of Juvenile 29.26