Detail information of GWHGAAEX016272/evm.TU.scaffold_74.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16099.00E-81Protein involved in mRNA turnover and stability
nrgi|743763062|ref|XP_010911105.1|1.50E-154PREDICTED: uncharacterized protein LOC105037099 isoform X1 [Elaeis guineensis]
trEMBLtr|A0A067K8V9|A0A067K8V9_JATCU9.00E-136Uncharacterized protein {ECO:0000313|EMBL:KDP31468.1}
TAIRAT5G637809.00E-81RING/FYVE/PHD zinc finger superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000070298765332602-
Transcript Sequence

Network for GWHGAAEX016272

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.820
SRR2545915Juvenile tuber33.110
SRP108465SRR5643513five period of Gastrodia elata19.490
SRR5643514five period of Gastrodia elata21.600
SRR5643515five period of Gastrodia elata21.260
SRR5643524five period of Gastrodia elata20.540
SRR5643525five period of Gastrodia elata28.830
SRR5643528five period of Gastrodia elata29.470
SRR5643658five period of Gastrodia elata45.630
SRR5643659five period of Gastrodia elata23.050
SRR5643660five period of Gastrodia elata24.110
SRR5643661five period of Gastrodia elata19.960
SRR5643662five period of Gastrodia elata21.720
SRR5643663five period of Gastrodia elata26.120
SRR5643664five period of Gastrodia elata25.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.630
SRR6049655Rhizomagastrodiae_C368-T10_good_115.180
SRR6049656Rhizomagastrodiae_C368-T07_good_118.850
SRR6049657Rhizomagastrodiae_C368-T07_good_128.850
SRR6049658Rhizomagastrodiae_C368-T04_good_120.930
SRR6049659Rhizomagastrodiae_C368-T04_good_120.870
SRR6049660Rhizomagastrodiae_C368-T01_good_119.250
SRR6049661Rhizomagastrodiae_C368-T04_good_119.830
SRR6049662Rhizomagastrodiae_C368-T01_good_115.080
SRR6049663Rhizomagastrodiae_C368-T01_good_114.740
SRR6049664Rhizomagastrodiae_C368-T10_good_118.590
SRR6049665Rhizomagastrodiae_C368-T10_good_118.590
SRP279888GastroGastrodia elata tuber 48.35
JuvenJuvenile tuber48.62
Mother_GastroMother tuber of Gastrodia elata 40.47
Mother_JuvenMother tuber of Juvenile 42.10