Gene detail

Detail information of GWHGAAEX016275/evm.TU.scaffold_74.12

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672181425\|ref\|XP_008810929.1\|	6.99E-176	PREDICTED: uncharacterized protein LOC103722232 [Phoenix dactylifera]
trEMBL	tr\|W9R9K3\|W9R9K3_9ROSA	4.00E-159	Uncharacterized protein {ECO:0000313\|EMBL:EXB60098.1}
TAIR	AT1G21740	1.00E-136	Protein of unknown function (DUF630 and DUF632)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000070	1016419	1039719	+

Transcript Sequence
>GWHTAAEX016275 GTAAAAATAATGCTAAAATAGAAAGAATACAAAATATTTTCATGCAAAACTTGAATTTGAAAAAAAAATTAAGTGTTTAATAGTGAACAGTATATTTGTGTTCTACGAACGCAGCACACGCCGCGTAAATGCCCGATATAGCATTTAAAATACTAGCCGCATAAGAGTGAAAAATAGCTAGAGCAATTCTATGCGGGACGGTCGTACGGCTTCCTTTCCTCTACAGTTACATCACTCCCCGATCACGTGCACAGCGCGATTCTCCAGGACCCAGTCGGTAATGTCGCCACGTGTTCCTTTTCCATCGTCCCTCTTCTCCTTCAGTTTCTAATTCCAGTTCGTTTCCCCCCACCCCGTTTCTCTTCGTTTCCATCTGCATCTCCCTCTCTCGCTTAAAACCTCCCACATTGTCTACATCGATCACGCAGTATGTGCTCGGACAACGATGTTTGAGCATCAGGTCATCTTCATTATCCCGATCTTAGTGCTTTTTTAGTTGGAATATGAAATTGCTGGTGGCAGAATGGCAATGCTCGGCGGTTCCATGCGAACTGAACGTTCGGTAGGGGTAGGGTTAGGGTTTTAGGGCTTCGATGTTCCAATGGGGTGTGCGAGCTCGAAGGCTGACGATCTTCCCCTTGTGGCATTATGCCGGGAGCGGACGGAACTAATCCGTGCTGCTGTCAATCATCGTTACGTCTTGGCTGCCGCTCATGCCTCATATTTCCGTGCTCTCGACCGCGTTGGCGAAGCCCTTAACAGATTCGCTGCCGAGGAGCTGGTCACGGCCCCAGCATCCCCTGTTCTGACCCTCCCTCCTTCCGAAGGCAAGCCTCCGAAGGCCAAATCCTGCGGATCGAGCGCTCCGAAGGGCGACAATGCCTCTAACGCGGCCTTCTCTCCCCCTCCATCTCCCTCCTCTTCTTCTGTTTCTCCATTCTCTGGATCTCATTTGGACGACGAATGTCATCACCTCGATGACCCTTCCTGCTCCGAAACGGAAGAAAGGTTTGAGGGAAGCCACATCGGAGCGGTGGGTGGGGAAGGATGGGGCTCTTTGCCTCATTCCGCTTTTTTCCCCGCTTTTCCTAATGCGAACTCTTACTACATGAAGGCCGCTCCGACGATGCCGTCCACTTTCTATCAGGATCCTCGAGGATATGCACAGAGTCAGCGGTTTGGGTTTGGTTATGGCTATGGGTTCGGGTATCCGTCGTTTGTTCAGGAAAATACTTATTCTTATGAGCCACCAGCTGCGCATTCATCTGGCGAAACACGGCCGCCACCTCCGCCTCCTCCTCCTCCTCCGCTTCAGGGGTCGTCATGGGACTTCTTTAACCATTTTGATTCATATGAGAAAATGTTTGATGGGCACGCCAAGTCTAGATTTGGTTTGGGATCGGTTATGAGTAGTCCCAATTCCAGTGAAGTCAGGGAGCAGGAAGGTATTCCTGATCTGGAGGAAGAGACCGATCCAGAATATGTGAAAGAAACTGGGAGACAACGGTCGATTTTGCAAGAGAAGAGGGTGAACGATGATGATTCGGATAGGTTTAATTCCAGTGTTGGTAGCTCAGAAGCAGTGGCTGTGCCTCCTCTGAATGAGAAGAGTAGTCCGATAATGCCTGAGGAGGAGCAGGAAGATATCAAAATGAGGCTTGGTAGCGGCAATCTGAAGAAAACTGGGGAAGTTAAGGAGAAGGACGCTAGGAATGAAAGGTTGGGTTTTGAGGAGGCCGTGAACTCTGTAATAATGGATGAGAGTCTTCAGAGCAGGGATGCTGCATTGTTCGTTCAGAGAACAAGGGATGTTGCTGAAGCTGTGAAGGAGATCACAGAACAGTTTAAATCTGCAGCTTCTTGTGGTGAAGACGTTTCAAAATTGCTAGAGGTTGGTAAGATACAGTATCGACCAAGAATTAGAATTTTCAAAGGTACAAGTATGCTGAAAATGAATGAAGCTACGTGCACTGATTTTGTGAAGTACATTTCCGTGAAGTCCACCAACCTTTCCTCAACTCTAGCACAATTGTACCTGTGGGAGAAAAAACTGTACAAGGAAGTCAAGGATGAGGAGAGGCTGCGACTGTTTTACGACAAAGAGTACAGCCGGCTCAAAGCATTGGATGGCAGAGGAGCGGAGTCCAGTAAGATTGATTCTGTGCGGGCCACAATAAGCAAGCTCATCACAAAGATAAGCATGACAATTAAATCTATAGATGCCATATCAAGAAGGATACACAAGCTCAGGGATGAAGAGTTGCGGCCCCAATTGGTTGAATTAATTCATGGTATAATAGGAATGTGGAGATCAATGGTGGAGTGCCATCAGAGGCAGTTCCAGGCAATATTTGAAGCCAGAGGGAAGACACTGCTCAGTTCCATTTCGCAGCAGGGCCCGACAGCCAAAGTGACGTCGGATCTGGAGCTGGAGCTGAGCAACTGGTGCTCCTGCTTCGGCAAGTGGGTCAGTGCCCAGAAAGCTTACATCCAGTCTCTGAACGCATGGCTGATGAAGTGGCTCAATCAGGAGGGCCGAGACGAGGCAATTTCTGACGGCATCCCACCGTTTGCCCCGTCCATCTTCGTCCTGTCCAATGATTGGCGCCATGCCGTCGAGCAGACCTCCGAGGACAGCGTCCTCGCAGCAATGCGCGCCCTCGCCTCCAATCTCCGCCGGCTCTGTGAGAGCCAGGACGAGGAGCGGCAGCGGAAGATGAAGGCGGACTTTCTTTCCAAGGAGCTCGCCAGGAAGCTGAACGGCCCCTGTAATGCCACCGCCGAGGACGGTGGGCATCTCACTCACTTGGATCTGATGCGAAGGAGGATCGACGAGGAGAGGGCCAAGCACGCCGACGCCATGAAACAGATCCAGGAGATCGCCTCCTACAGTTTCAAGACTGGCCTCATTCCGGTTTTCCAGGCTTTGGAGAATTACAGCTCCGACACCCTTAAATGCTACGCCGAACTCCGCCTGTCCACACCTTCTTGATCTTCTTAGGTGATGCTGATTTTCAAAAAAAGGTGCGGCTGTATCTCAGTTTTGCAATAATGATGGTATTGAATCATGTTCACATTTATTTTTGTACTGTTGTTATTTGTTTTCACTTGAAGATGCTTGAGAGCTTTCAAGAGATACTCTTATTATTTCCTCTTTGCTTCAATTTTTGGAATGAAATTGAGAATGATGTTTAGCATCATCTTAGTTTAGTTTGGCAC

Network for GWHGAAEX016275

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04783.11	DUF630	1	59	4.50E-24
PF04782.11	DUF632	405	692	9.40E-100

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.280
SRP064423	SRR2545915	Juvenile tuber	5.290
SRP108465	SRR5643513	five period of Gastrodia elata	6.120
	SRR5643514	five period of Gastrodia elata	6.020
	SRR5643515	five period of Gastrodia elata	5.560
	SRR5643524	five period of Gastrodia elata	4.840
	SRR5643525	five period of Gastrodia elata	1.330
	SRR5643528	five period of Gastrodia elata	1.060
	SRR5643658	five period of Gastrodia elata	1.380
	SRR5643659	five period of Gastrodia elata	5.250
	SRR5643660	five period of Gastrodia elata	3.060
	SRR5643661	five period of Gastrodia elata	4.800
	SRR5643662	five period of Gastrodia elata	2.800
	SRR5643663	five period of Gastrodia elata	3.980
	SRR5643664	five period of Gastrodia elata	2.160
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.570
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.260
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.860
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.670
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.320
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.100
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.910
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.600
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.780
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.190
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.190
SRP279888	Gastro	Gastrodia elata tuber	1.46
	Juven	Juvenile tuber	3.10
	Mother_Gastro	Mother tuber of Gastrodia elata	0.62
	Mother_Juven	Mother tuber of Juvenile	0.63