Gene detail

Detail information of GWHGAAEX016278/evm.TU.scaffold_74.17

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|116626608\|ref\|YP_828764.1\|	5.00E-25	hypothetical protein Acid_7571 [Candidatus Solibacter usitatus Ellin6076]
nr	gi\|695048003\|ref\|XP_009411896.1\|	0	PREDICTED: uncharacterized protein LOC103993528 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0TNN0\|M0TNN0_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P08270_001}
TAIR	AT1G21680	0	DPP6 N-terminal domain-like protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000070	1186160	1189500	-

Transcript Sequence
>GWHTAAEX016278 CCCCCTCCCCTGTTGATAGAGACATAACTTAATAAAAAAAGGAACCCATCAGTTCAATAAAAAAGACACCGTGGTGGGTGGATAGAAGCACAAATGCAGCTGAAGGAGTTCACCGGAGATGAGGAGGACAGCTTCTTGGCCGCATCTATTGATCTTGTTGTCCCTGTGGTTCTCCTTGCTCCTCTTCCCCGCCACAGTCCGGGGCTCTGGATCCATCGTCTTCTCCACTGGGGAACGGAGTCTCTATGGCTTCGACATCTTCTCCTGCAGCATGTTCTCGTCTTCCCCGCTCTCTGAGCTCCGGCTCACCGACGGCGTTTCCATAAACTACAACGGGTTCTTCCCCTCCTCCCCTTCATCCCTCCTCCGCCTCCTCAGCCCCTCCTCCCAATCACCCACTGCGGCCAACGCCGTCATCTACGTGTCGGAGCGCGGCGGCCGTTCTGCCATTTACGTAGACTTCTTCCCTTCCCCGTCGCTGAAGCGAGAAGAACCGGCCCGCCTCCGTTTCCCCCTCCTCCCCGCTTGTCCGGCATCCATGAAGGACCGCCCCTCCCTCTCCGGTGATAACCTCATCTTCATCTCCACCCATGAGCCCTCTTCCTTTCCCAGGCAGAGCTGGGCCGCCGTTTACTCCGCCCACCTCCCATCGGGTTCCGTCGCTCGCCTCACCCCTGCCAAAATCTCCGACTTTAGCCCCTCCGTCTCCCCCTCTGGGCTCTGGACCGCCGTAGCCTCCTCCGGCAGGCGGCCCTGGTCGGGCGAAATGCAGGAGCTGAGCACTGGCATTTATGTCTTCGCCACGGCAAGCGGATCCAATCGAACGCTGATAGTGGAGCGCGGCGGGTGGCCCTGCTGGGCGGACGACTCAACTCTCTACTTTCACCGCAAGAGCTCCTCCGACGGATGGTGGGGGATTTACCGTGCCTCGATCGGCATCCAATCCGGCCGCCCCATCCTAATCGCCACCCGCCGATTAACCCCTCCCGGCCTCCACGCCTTCACTCCGGCGGTAAGCCCCAATGCGCCGGATCTGGTAGCTGTGGCCACGAGGAGACCCTCCTCGGAGTTCCGCCACATCGAGCTCTTGGATCTCAGGCAAGGAAGGAGCAGCTTCGTGGAGGTCACCAGGCTGATCGCCCCGCACGCCCATCATTACAACCCCTTCATCTCGCTGGCCGGAAGCAGGATCGGGTACCATAGGTGCAGAGGCGGCGGCATGCCTCCTCCGTTGCTTCTGGAGAGCATCCAGAGCGCGTCGGAGGCCTTCTCTCTTTTTAGAATCAATGGAATTTTCCCTTCCTTCTCTCCGGACGGGAGGGTAGCGTATGCGAAGCTCCCCGGCTTGTGCGTTGTGGACTCGGACGGGTCGAACCCGAGAGAGGTTCTCAGCGGCAATGCCTTTGCTACTGCTTGGGATTGGAAGAGGAAAGGGGTTCTTTATGCCAGCCAGGGCCCGGCATTCGCTGAAGAGAGCGCGGGAGTGGACATCGTCTCCATCACTCTAAGAGAAGAAAAAGAAGCTGTTGTGAAGAAGCTTACTCTAGGAGGGCAAAACAATGCGTTTCCGTCGCCTTCTCCGGACGGAAAGTGGGTGGTTTTTCGATCGGGGCGGTCAGGGCACAAAAATCTGTACGTGATGGACGCGGTGGAAGGGGAGAGCGTGGGGATTTACAGGCTGACGAAGGGGCGGTGGAGTGACACCATGTGCAATTGGTCCCCTAATGGAGAATGGATAGCCTTCGCTTCTGACAGGGAGAATCCCGGGAGCGGGAGCTTTGCCATATACATGGTTCACCCCAATGGGACGGGGTTGAGGAGAGTGGTGGCCAGCGGGCGAGGCGGGAGGGCCAACCATCCCTGCTTCAGCCCGGACTCCAACAACTTGGTCTTCACCTCCGACTACGCCGGCGTCTCCGCCGAGCCCATCGCCAATCCCCACCAATTCCAGCCTTACGGGGACCTCTTCACCGTCAGGATCGACGGCACCGGCATTAAACGGCTCACGCACAACGCTTACGAGGACGGCACCCCCACCTGGACGCACTTCTCCTTGGGCACTTCTGACGTCGCCGATTCTTCTTCGCCTGCCCGCTGGTGCCGCTTCGATGATTGCCGCTGGCTTGCCTTTTCCAATGCAACAGTTTGCTCGCCAGTTAGCTCTCTTTGTGCTAATGCTGGGTCTCAAAACGGATCAGCCAATTACTAAGTTCGTCATCCTGTAACACTTCCAGGATTACAATTCCTGCTGCTGTAAAAGGGCCGCTTCGAGCTTCCAGGATTACATTTGAAAAGCTCTGTATGTTTTTAATGAACTATATATTAAGAAAATTTATTTACAGCCGTTTGATGGAATCAAATGACAGCTTACAAGCTTGCTGAGCTCAGCTCGAGCCGGGCACAACAAGTTAGTCATATCTCGAGCCTAGCAAATCATGAGCAAGGGAGGTGCAATGGCGACAGAGGAGAGGAGAGGAGCATTGTGGCAGCGTGGAGAAGATGAGCGGAGGTTAGTGGTGGGATGGAGGAGACTCCACCATATAGAAGCCCAGGCGAGTAATCCTCTCACTGCACTCGGATGTAATACGGACGGCGCCAGTGATACTACCCTCTTCTTTGGCATCTCTGGTAAGCAGAGGCATCCATCCCACCCGGCTCCAATGCCCCCCATTTCTCTGACCTCCCATTTCGGACACCAGACACCGGCAAGACGACCCTGTCCACAAATCAAAATGTTTGCTTGTCTCCTCCGTCGTCATCGCCCAGCACAGCCGCCCGGTGTCCGGCTGCTACCGTTAGATAGAGGGATAGTTTTGAATATTTTAAGGACTCAGGGTTATACGTATTACCATCTGCCATGTCCTTGTCTTGTGAAGCAGAAAAGTCCCTGAAAGAATGGTCACAAATCCACACATCTCCGTGACTATTTGCGCCGGGCTTTGCCTATCCCAATCCTGCTATGGTGCCCGTGTAATTATTTCGATCATGCTTAATGATACTTAACAGAACAGCAGCAGCAGAAAATCTTCA

Network for GWHGAAEX016278

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07676.11	PD40	472	507	4.00E-06
PF07676.11	PD40	533	558	6.50E-06
PF07676.11	PD40	580	595	0.31

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	38.260
SRP064423	SRR2545915	Juvenile tuber	32.240
SRP108465	SRR5643513	five period of Gastrodia elata	170.270
	SRR5643514	five period of Gastrodia elata	91.890
	SRR5643515	five period of Gastrodia elata	102.620
	SRR5643524	five period of Gastrodia elata	98.970
	SRR5643525	five period of Gastrodia elata	97.370
	SRR5643528	five period of Gastrodia elata	62.750
	SRR5643658	five period of Gastrodia elata	104.570
	SRR5643659	five period of Gastrodia elata	81.150
	SRR5643660	five period of Gastrodia elata	74.980
	SRR5643661	five period of Gastrodia elata	91.460
	SRR5643662	five period of Gastrodia elata	58.910
	SRR5643663	five period of Gastrodia elata	66.780
	SRR5643664	five period of Gastrodia elata	63.270
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	136.740
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	119.210
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	125.490
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	145.650
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	65.790
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	73.260
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	91.380
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	109.620
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	78.390
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	57.390
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	120.650
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	120.650
SRP279888	Gastro	Gastrodia elata tuber	42.45
	Juven	Juvenile tuber	98.93
	Mother_Gastro	Mother tuber of Gastrodia elata	23.23
	Mother_Juven	Mother tuber of Juvenile	30.61