Detail information of GWHGAAEX016290/evm.TU.scaffold_74.35
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|307154863|ref|YP_003890247.1| | 7.00E-122 | NADH:flavin oxidoreductase [Cyanothece sp. PCC 7822] |
| KOG | KOG0134 | 0 | NADH:flavin oxidoreductase/12-oxophytodienoate reductase |
| nr | gi|743764974|ref|XP_010912703.1| | 0 | PREDICTED: putative 12-oxophytodienoate reductase 11 [Elaeis guineensis] |
| Swissprot | tr|Q69TI0|OPR5_ORYSJ | 0 | Putative 12-oxophytodienoate reductase 5 |
| trEMBL | tr|M0S9S1|M0S9S1_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P20800_001} |
| TAIR | AT1G76690 | 0 | 12-oxophytodienoate reductase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000070 | 2104802 | 2107364 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016290
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00724.19 | Oxidored_FMN | 11 | 344 | 1.00E-90 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05894 | OPR | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0010181 | Molecular Function | FMN binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.450 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 8.460 |
| SRR5643514 | five period of Gastrodia elata | 18.570 | |
| SRR5643515 | five period of Gastrodia elata | 20.980 | |
| SRR5643524 | five period of Gastrodia elata | 8.340 | |
| SRR5643525 | five period of Gastrodia elata | 1.290 | |
| SRR5643528 | five period of Gastrodia elata | 1.140 | |
| SRR5643658 | five period of Gastrodia elata | 0.230 | |
| SRR5643659 | five period of Gastrodia elata | 0.170 | |
| SRR5643660 | five period of Gastrodia elata | 0.270 | |
| SRR5643661 | five period of Gastrodia elata | 0.190 | |
| SRR5643662 | five period of Gastrodia elata | 0.500 | |
| SRR5643663 | five period of Gastrodia elata | 0.140 | |
| SRR5643664 | five period of Gastrodia elata | 0.340 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 46.060 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 47.440 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 47.630 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 15.550 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 55.260 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 38.370 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 14.160 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 22.190 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 117.780 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 71.440 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 203.690 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 203.690 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.44 |
| Juven | Juvenile tuber | 0.49 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.21 | |
| Mother_Juven | Mother tuber of Juvenile | 6.37 |