Detail information of GWHGAAEX016294/evm.TU.scaffold_74.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17216.00E-127FOG: Zn-finger
nrgi|695023959|ref|XP_009399174.1|2.56E-154PREDICTED: zinc finger protein STOP1 homolog [Musa acuminata subsp. malaccensis]
Swissprottr|Q943I6|STOP1_ORYSJ2.00E-140Zinc finger protein STOP1 homolog
trEMBLtr|M0T882|M0T882_MUSAM2.00E-145Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P18840_001}
TAIRAT1G343706.00E-127C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007025279612529283-
Transcript Sequence

Network for GWHGAAEX016294

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.370
SRR2545915Juvenile tuber17.720
SRP108465SRR5643513five period of Gastrodia elata17.370
SRR5643514five period of Gastrodia elata17.220
SRR5643515five period of Gastrodia elata20.520
SRR5643524five period of Gastrodia elata19.650
SRR5643525five period of Gastrodia elata26.190
SRR5643528five period of Gastrodia elata29.490
SRR5643658five period of Gastrodia elata27.670
SRR5643659five period of Gastrodia elata19.440
SRR5643660five period of Gastrodia elata17.620
SRR5643661five period of Gastrodia elata20.880
SRR5643662five period of Gastrodia elata18.360
SRR5643663five period of Gastrodia elata18.470
SRR5643664five period of Gastrodia elata19.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.780
SRR6049655Rhizomagastrodiae_C368-T10_good_123.530
SRR6049656Rhizomagastrodiae_C368-T07_good_121.320
SRR6049657Rhizomagastrodiae_C368-T07_good_120.690
SRR6049658Rhizomagastrodiae_C368-T04_good_117.350
SRR6049659Rhizomagastrodiae_C368-T04_good_122.360
SRR6049660Rhizomagastrodiae_C368-T01_good_118.630
SRR6049661Rhizomagastrodiae_C368-T04_good_119.460
SRR6049662Rhizomagastrodiae_C368-T01_good_118.120
SRR6049663Rhizomagastrodiae_C368-T01_good_116.710
SRR6049664Rhizomagastrodiae_C368-T10_good_120.530
SRR6049665Rhizomagastrodiae_C368-T10_good_120.530
SRP279888GastroGastrodia elata tuber 18.13
JuvenJuvenile tuber16.63
Mother_GastroMother tuber of Gastrodia elata 25.31
Mother_JuvenMother tuber of Juvenile 23.31