Detail information of GWHGAAEX016300/evm.TU.scaffold_74.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672122361|ref|XP_008784510.1|8.21E-134PREDICTED: uncharacterized protein LOC103703441 isoform X1 [Phoenix dactylifera]
trEMBLtr|M0T2I6|M0T2I6_MUSAM4.00E-117Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P28620_001}
TAIRAT5G324407.00E-39Ubiquitin system component Cue protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007028455852862490+
Transcript Sequence

Network for GWHGAAEX016300

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms86.750
SRR2545915Juvenile tuber85.440
SRP108465SRR5643513five period of Gastrodia elata28.100
SRR5643514five period of Gastrodia elata35.270
SRR5643515five period of Gastrodia elata37.140
SRR5643524five period of Gastrodia elata37.420
SRR5643525five period of Gastrodia elata52.340
SRR5643528five period of Gastrodia elata38.340
SRR5643658five period of Gastrodia elata52.980
SRR5643659five period of Gastrodia elata50.000
SRR5643660five period of Gastrodia elata64.520
SRR5643661five period of Gastrodia elata53.060
SRR5643662five period of Gastrodia elata63.130
SRR5643663five period of Gastrodia elata71.160
SRR5643664five period of Gastrodia elata81.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.810
SRR6049655Rhizomagastrodiae_C368-T10_good_132.080
SRR6049656Rhizomagastrodiae_C368-T07_good_124.330
SRR6049657Rhizomagastrodiae_C368-T07_good_135.700
SRR6049658Rhizomagastrodiae_C368-T04_good_134.970
SRR6049659Rhizomagastrodiae_C368-T04_good_141.250
SRR6049660Rhizomagastrodiae_C368-T01_good_131.940
SRR6049661Rhizomagastrodiae_C368-T04_good_132.940
SRR6049662Rhizomagastrodiae_C368-T01_good_118.870
SRR6049663Rhizomagastrodiae_C368-T01_good_119.550
SRR6049664Rhizomagastrodiae_C368-T10_good_121.810
SRR6049665Rhizomagastrodiae_C368-T10_good_121.810
SRP279888GastroGastrodia elata tuber 75.49
JuvenJuvenile tuber85.82
Mother_GastroMother tuber of Gastrodia elata 54.66
Mother_JuvenMother tuber of Juvenile 67.47