Detail information of GWHGAAEX016301/evm.TU.scaffold_74.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428224325|ref|YP_007108422.1|1.00E-169NAD-dependent epimerase/dehydratase [Geitlerinema sp. PCC 7407]
KOGKOG14290dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase
nrgi|743780876|ref|XP_010920645.1|0PREDICTED: UDP-glucuronic acid decarboxylase 6-like isoform X1 [Elaeis guineensis]
Swissprottr|Q9ZV36|UXS6_ARATH0UDP-glucuronic acid decarboxylase 6
trEMBLtr|M0TS90|M0TS90_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P20870_001}
TAIRAT2G287600UDP-XYL synthase 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007028637042877984-
Transcript Sequence

Network for GWHGAAEX016301

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16363.4GDP_Man_Dehyd363301.40E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08678UXS1, uxs Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms188.440
SRR2545915Juvenile tuber252.560
SRP108465SRR5643513five period of Gastrodia elata129.610
SRR5643514five period of Gastrodia elata132.340
SRR5643515five period of Gastrodia elata124.820
SRR5643524five period of Gastrodia elata136.380
SRR5643525five period of Gastrodia elata453.510
SRR5643528five period of Gastrodia elata307.450
SRR5643658five period of Gastrodia elata866.490
SRR5643659five period of Gastrodia elata126.650
SRR5643660five period of Gastrodia elata111.690
SRR5643661five period of Gastrodia elata97.630
SRR5643662five period of Gastrodia elata124.500
SRR5643663five period of Gastrodia elata114.570
SRR5643664five period of Gastrodia elata119.970
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1127.260
SRR6049655Rhizomagastrodiae_C368-T10_good_191.530
SRR6049656Rhizomagastrodiae_C368-T07_good_1143.120
SRR6049657Rhizomagastrodiae_C368-T07_good_1116.240
SRR6049658Rhizomagastrodiae_C368-T04_good_1155.120
SRR6049659Rhizomagastrodiae_C368-T04_good_1167.350
SRR6049660Rhizomagastrodiae_C368-T01_good_1133.560
SRR6049661Rhizomagastrodiae_C368-T04_good_1156.680
SRR6049662Rhizomagastrodiae_C368-T01_good_1169.090
SRR6049663Rhizomagastrodiae_C368-T01_good_1167.120
SRR6049664Rhizomagastrodiae_C368-T10_good_1148.160
SRR6049665Rhizomagastrodiae_C368-T10_good_1148.160
SRP279888GastroGastrodia elata tuber 125.69
JuvenJuvenile tuber58.50
Mother_GastroMother tuber of Gastrodia elata 105.33
Mother_JuvenMother tuber of Juvenile 71.75