Gene detail

Detail information of GWHGAAEX016303/evm.TU.scaffold_74.50

Functional Annotation

Database	Orthologs	Annotation
COG	gi\|383761693\|ref\|YP_005440675.1\|	chaperone protein DnaK [Caldilinea aerophila DSM 14535 = NBRC 104270]
KOG	KOG0101	Molecular chaperones HSP70/HSC70, HSP70 superfamily
nr	gi\|449449994\|ref\|XP_004142749.1\|	PREDICTED: heat shock cognate 70 kDa protein-like isoform 1 [Cucumis sativus]
Swissprot	tr\|P09189\|HSP7C_PETHY	Heat shock cognate 70 kDa protein
trEMBL	tr\|A0A0A0KQW6\|A0A0A0KQW6_CUCSA	Uncharacterized protein {ECO:0000313\|EMBL:KGN51294.1}
TAIR	AT5G02500	heat shock cognate protein 70-1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000070	3016031	3018525	+

Transcript Sequence
>GWHTAAEX016303 ATGGCGGCAAAGGGCGAAGGTCCAGCAATCGGCATCGATCTCGGAACGACGTACTCCTGCGTCGGCGTTTGGCAGCATGATCGGGTGGAGATCATTGCTAATGACCAAGGAAATCGAACCACCCCTTCGTATGTCGCGTTCACTGATACCGAAAGGCTGATAGGCGACGCGGCCAAGAACCAGGTTGCTATGAACCCCATCAACACCGTGTTTGATGCCAAGCGTCTGATAGGCCGGCGGTTCTCCGATCCTTCGGTGCAGAACGACATGAAGCTGTGGCCCTTCAAGATCATTCCCGGCTCCGGAGACAAGCCCATGATCGTCGTCAGCTACAAGGGAGAGGATAAGCAGTTCTCTCCGGAGGAGATCTCCTCCATGGTCCTCACAAAGATGAGAGAAATCGCCGAAGCTTTCCTCGGTAAAAGCGTGAAGAATGCCGTGGTGACAGTCCCCGCCTACTTCAACGACTCCCAGAGGCAGGCGACCAAGGACGCCGGCGTCATAGCCGGACTCAACGTCATGCGAATCATCAACGAGCCCACCGCAGCCGCCATCGCTTACGGCCTCGACAAGAAGGCCAGCAGCGTGGGCGAGAAGAACGTCCTCATCTTCGACCTAGGCGGGGGAACCTTCGACGTCTCCCTTCTCACCATCGAGGAGGGCATCTTCGAGGTGAAGGCCACCGCCGGAGACACTCACCTCGGCGGCGAAGATTTCGACAACAGGCTGGTGAATCATTTCGCGCAGGAGTTCAAGCGGAAGCACAAGAAGGACATCACGGGAAACCCCAGGGCGCTGCGAAGACTCCGGACCGCCTGCGAGAGAGCCAAGAGGACCCTTTCTTCCACCGCCCAGACCACCATCGAGATCGACTCTCTCTACGAAGGCATCGATTTCTACACCACTATCACCCGCGCCAGGTTCGAAGAGCTGAACATGGATCTCTTCCGGAAGTGCATGGAGCCGGTGGAGAAGTGCCTGAGGGACGCTAAGATGGACAAGAGCACCGTCCATGACGTTGTCCTGGTCGGAGGATCTACCCGAATTCCCAAAGTCCAGCAGCTGCTTCAGGACTTGTTTAACGGCAAGGAGCTTTGCAAGAGCATAAACCCCGATGAAGCCGTGGCATACGGCGCCGCCGTCCAGGCCGCAATACTGAGTGGAGAGGGCAACGAGAAGGTGCAGGATCTCCTCCTTCTCGACGTCACCCCTCTGTCTCAGGGACTGGAGACGGCTGGTGGTGTCATGACGGTCTTGATTCCTAGGAACACCACCATTCCCACCAAGAAAGAGCAAGTTTTCTCAACGTATTCAGACAACCAGCCTGGGGTGCTCATCCAGGTCTTCGAAGGTGAGAGGACGAGGACCAAAGACAACAACCTGCTTGGCAAATTTGAGCTTTCCGGCATCCCGCCGGCCCCCCGCGGTGTGCCTCAGATCAACGTTTGCTTCGACATTGATGCCAATGGCATTCTGAATGTGTCTGCCGAGGACAAGACCACCGGCCAAAAGAACAAGATCACCATCACCAACGACAAGGGCAGGCTCAGCAAGGAGGAGATTGAGAATATGGTGCATGAAGCCGAGAAGTACAAGTCGGAGGACGAGGAGCATAAGAAGAAGGTGGAGGCGAAGAATGCCCTCGAGAACTACGCTTACAATATGAGGAACACAATCAACGACGACAAGATCGGAGAGAAACTGAGTCCAGCAGATAAGAAGACGATCCAGGAGAAGATAGATCAGGCCATTCAGTGGTTGGATGGGAACCAGCTTGCCGAAACGGACGAGTTTGAGGACAAGATGAAGGAGCTTGAGGCTATTTGTAATCCGATTATTGCTAAGATGTATCAGGGAGAGGGCGGCGGGGATTCTATGGACAGTGATGGTGCTGGCGGTAGCGGTAGCGGCGGCGGCGGCGCGGGTCCTAAGATCGAAGAGGTTGATTGAATACTGTCTAAAATTTGGAAGATGAATGAATAATGGTAGTTTTGTTGTAACAGCATAGGTGTGGTGCTTACAGTCGTTTGCTTTTGTTGCAGCGATGTTTGTTCTATCTGTTGATCTTTGTACTAATCATGTTTTCTATCATGTCCAAAAACAACTAAGTACAATACACTTAAAGTATTCATAATTAAATAGTCAATTAATTCAATTAAGTAGATTTTACATTTCATCATCTGATGTAATACATAATAGTTACTCTTACTGTATGATACTTTTATCTATCTTTTAAATTAGAATATATTAAACTTAATCTCACATCTTCATCCGAATGTGTACAACTAGTTTAAGACTTAGTAAACCA

Network for GWHGAAEX016303

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00012.19	HSP70	9	618	6.00E-263

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K03283	HSPA1s	Spliceosome	map03040
		Protein processing in endoplasmic reticulum	map04141
		MAPK signaling pathway	map04010
		Endocytosis	map04144
		Antigen processing and presentation	map04612
		Estrogen signaling pathway	map04915
		Longevity regulating pathway - multiple species	map04213

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	444.880
SRP064423	SRR2545915	Juvenile tuber	4390.490
SRP108465	SRR5643513	five period of Gastrodia elata	59.990
	SRR5643514	five period of Gastrodia elata	20.880
	SRR5643515	five period of Gastrodia elata	78.950
	SRR5643524	five period of Gastrodia elata	27.540
	SRR5643525	five period of Gastrodia elata	1740.460
	SRR5643528	five period of Gastrodia elata	1774.420
	SRR5643658	five period of Gastrodia elata	261.480
	SRR5643659	five period of Gastrodia elata	485.910
	SRR5643660	five period of Gastrodia elata	563.120
	SRR5643661	five period of Gastrodia elata	549.820
	SRR5643662	five period of Gastrodia elata	465.930
	SRR5643663	five period of Gastrodia elata	583.980
	SRR5643664	five period of Gastrodia elata	728.610
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	165.550
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	60.600
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	111.580
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	142.470
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	139.150
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	180.190
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	101.630
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	146.850
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	72.390
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	95.320
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	55.440
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	55.440
SRP279888	Gastro	Gastrodia elata tuber	910.62
	Juven	Juvenile tuber	211.32
	Mother_Gastro	Mother tuber of Gastrodia elata	446.46
	Mother_Juven	Mother tuber of Juvenile	242.68