Gene detail

Detail information of GWHGAAEX016314/evm.TU.scaffold_74.68

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|284030585\|ref\|YP_003380516.1\|	5.00E-06	metallophosphoesterase [Kribbella flavida DSM 17836]
KOG	KOG2134	0	Polynucleotide kinase 3' phosphatase
nr	gi\|743842799\|ref\|XP_010937899.1\|	0	PREDICTED: transcription factor bHLH140 isoform X2 [Elaeis guineensis]
Swissprot	tr\|Q9M041\|BH140_ARATH	0	Transcription factor bHLH140
trEMBL	tr\|G7I746\|G7I746_MEDTR	0	Transcription factor bHLH140-like protein {ECO:0000313\|EMBL:AES59709.2}
TAIR	AT5G01310_2	0	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000070	4053741	4114940	-

Transcript Sequence
>GWHTAAEX016314 TGCTAGAGTACCTTCGTGGCGTTAGACGGCAAGTGTAGGGGAAGACGTCAATGATTGAGCCACTTGAACGAGACGGTGGTCGACCTTAGGGGTCAGAATTCTTACGAAGAAGTTCAAAAGTTAATTGACATGTTCAGTAAAGTTTCGACCGCCATTTCTTATTAGAAGGATTTGGTGGTTCCTATTATCTACTTCTATGGCGGAAGGAGTCGGTACAATTTCTTCTACTATCAGTACCGGAGAAGAGAAAGAGGCAAAGCCCCTCGTCGTGATCCTCATCGGCGTTCCTGGAAGTGGGAAGTCAACCTTCTGCAACGACGTCATTAACACCGGTCGGCGCATCTGGACTCGTATTTGTCAGGACACTATAGCAAATGGAAAGGCTGGAACTAAAGCTCAGTGCTTACTGAGTGCTACAAATGCATTGCAGGAAGGTAAGAATGTTTTAATTGATAGATGCAACTTGGAGCTTGAGCAGCGGTCTGAGTTTGTGAAACTCGGTGGAGCACAAGCAGATGTGCACGCTGTGGTTCTTGATTTACCTGCCCAAGTTTGTATATCTCGATCAGTGAAGCGAATCGGGCATGAGGGGAACTTGCAAGGGGGAAATGCTGCTGCTGTTGTCAACCGCATGCTGCAGAAGAAGGTGCTACCAAAATTAAATGAAGGATTTTCTCTTATTACATTTTGTCAGGATGATGGTGATGTAAAAAATGCTGTGAATACATATAGATCTTTGGGATTGCTTGATAATTTGCCATCTGGTGTTATTGGCCGTAAAAGTGCCGATGCTAAAGTTCAACAAGGGATACTGAAATTTCTTAAGAAAGTTGACACTGATGGAAAAACTTCTCTGAATTTTTTTGCTAAGCATGAATGTGGTTCGCAAAGTTCTGCTGCCAAGGAAATTAATACCGGCAATATGGGACATGAAAAGGGAAATGAAGCTCGAGAAGATGTACAAAAGAGTCATGTGGCGCCAGAACCCTTTGTAAATGATTTTCAATGGAATGATGCCCCTACTTTGGCTTTTCCATCCATTTCAACATCAGATTTTCAGTTTGATCAGGATAAAGCTTCTGATGTTATTGTAGAGACTGTTGCTAATTTTTTGAGTAAGGTTGATAAGGTCAAACTTATTCTGGTGGATCTAAGTTCTAAATCAAAGATGCTATCTCTTGTTAGAGTCAAAGCATCAAAGAAAAATGTTGATACTAGCAGATTTTCAACTCATGCAGGGGACATAACTCAGCTTTATACTGTAGGTGGACTGCATTGCCATGCGATAGCCAATGCTGCCAACTGGCGGTTGAAGCCTGGAGGAGGTGGAGTTAATGCAGCTATTTTCAGCGCTGGAGGTGAAGCGTTAGAAATGGCCACAAAGGAACAGGCTGAGACTATTAGCCCTGGAAGCTCTATTATTGTTCCTGTTCCTAAAATTTCTCCCCTTTACCAAAGGGAAGGTGTGGCTTATGTCATTCATGTATTGGGACCAAACATGAACACTCATAGACCAAACTGTCTTAAAGATGACTATGTCAAGGGCTGTAAGGTTCTTTATGAGGCATACTGTTCACTTTTCGATAACTTTGCATTTATTGCTCAAAACCAAAGTTATCAAAAAGAATACAGAGGAGATTCACATTCTGGGCCATCAAAATCAATTGGCAAATCTTTTGAAGCAATAGATGAATATCAGTCATCGCCTGACGAGCAAAAGAGTAAGCGAAAAGATAGCCTTGGTTCTAATAGCAACAAAAAATCTAAATCCAATGAGGACTCTGGAAGCTTACTGCCACTACGCATTGGCATGATAGAGGGGAAGAAGCAGAAGAATGAAAGAACTATTCACTCTACAAAGAATTCTTGGGACTTGTGGGCTCATTCTCTTCACCAAATAGCAATGCATCCAGAGAAGCATACAAGTGATATTATCGAGATATCGAACAGTTTTGTTGTAGTAAATGACCTTTATCCCAAGGCAAAGAAACACTTGTTAGTTATATCAAGGCTGTCTGGTCTTGATGGTCTCTCTGATATCCGGCCAGAACATCTGCCAACGTTAGAGGAAATGCATACTGCTGGTCTTAAATGGGCTGAGAAGTTCACTAATCAGGACCCTTCTCTAGTTTTCAGACTCGGTTATCATTCGGTTCCGTCGATGCGACAATTGCACCTTCATGTTATCAGTCAGGATTTTGACTCTTCTTTTATGAAAAAGAAGAAGCATTGGAACTCATTTGTTACTCCTTTCTTCCGCGATTTCATTGATGTCGAGGAGGAGGTCAAAGTGAATGGGTCGGCGGTTGTAAAAGATGAGAAGTTGTTGTCCTCGGAACTGCGTTGCCATCGCTGTAGGAGTGCCCATCCAAATATACCAAGGCTCAAATCTCACATCTCTACTTGCAAGGCTCCCTTGCCTTCTCATTTTCAAAGCTATCAATTATTGTCTGTATCGTCCGCATCTTCTGAAGCTGTAGATGCTAACATGAAATGTTAAAAAAGATATTTGTTTAGTGCTCTTGTGGAGTTTTTTGTGCTTTTGATGTTTGAACTACTAAGAAACCTTGTTTTGTTGTTCAACAGAAAGTATGTTTATGTTAATGCTCATATACCTGGTAATTATTCCTACTATCCAATATCAGCATTAATACTTAGAGTGAGCCCAATTAAAGCCTCAATGTTGTGTTAGAAAGCAGAAGCTATAATATTCATTAACCAAGCAACCTGTTGGGCTCATAAAAAATGGCTGGGCTCATAAAGAAATTGAGCCAATGCAGTGCGCCAAG

Network for GWHGAAEX016314

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13671.5	AAA_33	24	131	6.80E-11
PF01661.20	Macro	365	438	2.00E-05
PF11969.7	DcpS_C	571	678	5.60E-25
PF16278.4	zf-C2HE	684	736	1.50E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	129.240
SRP064423	SRR2545915	Juvenile tuber	79.310
SRP108465	SRR5643513	five period of Gastrodia elata	28.450
	SRR5643514	five period of Gastrodia elata	21.960
	SRR5643515	five period of Gastrodia elata	22.490
	SRR5643524	five period of Gastrodia elata	21.100
	SRR5643525	five period of Gastrodia elata	24.670
	SRR5643528	five period of Gastrodia elata	24.250
	SRR5643658	five period of Gastrodia elata	27.770
	SRR5643659	five period of Gastrodia elata	26.410
	SRR5643660	five period of Gastrodia elata	30.300
	SRR5643661	five period of Gastrodia elata	27.130
	SRR5643662	five period of Gastrodia elata	26.130
	SRR5643663	five period of Gastrodia elata	28.620
	SRR5643664	five period of Gastrodia elata	31.120
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	50.900
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	39.950
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	42.050
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	58.410
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	64.280
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	85.540
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	53.600
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	62.570
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	37.710
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	53.840
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	38.980
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	38.980
SRP279888	Gastro	Gastrodia elata tuber	33.79
	Juven	Juvenile tuber	32.20
	Mother_Gastro	Mother tuber of Gastrodia elata	37.26
	Mother_Juven	Mother tuber of Juvenile	33.57