Detail information of GWHGAAEX016318/evm.TU.scaffold_74.73


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|645267387|ref|XP_008239046.1|1.62E-07PREDICTED: probable polygalacturonase [Prunus mume]
trEMBLtr|M5W9C6|M5W9C6_PRUPE6.00E-08Uncharacterized protein {ECO:0000313|EMBL:EMJ10342.1}
TAIRAT4G238205.00E-07Pectin lyase-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007045032144503370-
Transcript Sequence

Network for GWHGAAEX016318

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms50.040
SRR2545915Juvenile tuber15.920
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata538.390
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata3633.250
SRR5643528five period of Gastrodia elata738.410
SRR5643658five period of Gastrodia elata670.690
SRR5643659five period of Gastrodia elata442.350
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata636.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_133.330
SRR6049657Rhizomagastrodiae_C368-T07_good_130.870
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_129.030
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_115.160
SRR6049665Rhizomagastrodiae_C368-T10_good_115.160
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 813.53