Detail information of GWHGAAEX016319/evm.TU.scaffold_74.75
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15613348|ref|NP_241651.1| | 4.00E-29 | endo-beta-N-acetylglucosaminidase [Bacillus halodurans C-125] |
| KOG | KOG2331 | 0 | Predicted glycosylhydrolase |
| nr | gi|672168229|ref|XP_008804109.1| | 0 | PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Phoenix dactylifera] |
| trEMBL | tr|F6HCA6|F6HCA6_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB49830.1} |
| TAIR | AT3G11040 | 0 | Glycosyl hydrolase family 85 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000070 | 4504596 | 4576038 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016319
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03644.12 | Glyco_hydro_85 | 67 | 347 | 4.50E-92 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH85 |
| Carbohydrate-Active enzymes Family | GH85 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01227 | ENGASE | Other glycan degradation | map00511 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0033925 | Molecular Function | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 15.990 |
| SRR2545915 | Juvenile tuber | 17.250 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.820 |
| SRR5643514 | five period of Gastrodia elata | 15.170 | |
| SRR5643515 | five period of Gastrodia elata | 13.790 | |
| SRR5643524 | five period of Gastrodia elata | 14.850 | |
| SRR5643525 | five period of Gastrodia elata | 18.450 | |
| SRR5643528 | five period of Gastrodia elata | 15.810 | |
| SRR5643658 | five period of Gastrodia elata | 20.230 | |
| SRR5643659 | five period of Gastrodia elata | 15.610 | |
| SRR5643660 | five period of Gastrodia elata | 14.260 | |
| SRR5643661 | five period of Gastrodia elata | 13.060 | |
| SRR5643662 | five period of Gastrodia elata | 14.600 | |
| SRR5643663 | five period of Gastrodia elata | 15.160 | |
| SRR5643664 | five period of Gastrodia elata | 15.700 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 20.790 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.330 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.380 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.340 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 22.650 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 23.240 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 23.060 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 20.400 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.890 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 19.280 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 19.280 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 18.37 |
| Juven | Juvenile tuber | 22.10 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 18.94 | |
| Mother_Juven | Mother tuber of Juvenile | 14.71 |