Detail information of GWHGAAEX016321/evm.TU.scaffold_75.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|384216662|ref|YP_005607828.1|3.00E-57malic enzyme [Bradyrhizobium japonicum USDA 6]
KOGKOG12572.00E-125NADP+-dependent malic enzyme
nrgi|255571113|ref|XP_002526507.1|5.72E-132malic enzyme, putative [Ricinus communis]
Swissprottr|Q9SIU0|MAO1_ARATH6.00E-126NAD-dependent malic enzyme 1, mitochondrial (Precursor)
trEMBLtr|B9SKH7|B9SKH7_RICCO2.00E-132Malic enzyme {ECO:0000256|RuleBase:RU003426}
TAIRAT2G135602.00E-125NAD-dependent malic enzyme 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007276138849-
Transcript Sequence

Network for GWHGAAEX016321

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00390.18malic1132223.30E-44
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00028E1.1.1.39 Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0004470Molecular Functionmalic enzyme activity
GO:0004471Molecular Functionmalate dehydrogenase (decarboxylating) (NAD+) activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.180
SRR2545915Juvenile tuber36.570
SRP108465SRR5643513five period of Gastrodia elata47.350
SRR5643514five period of Gastrodia elata49.270
SRR5643515five period of Gastrodia elata39.300
SRR5643524five period of Gastrodia elata43.210
SRR5643525five period of Gastrodia elata43.950
SRR5643528five period of Gastrodia elata36.800
SRR5643658five period of Gastrodia elata41.960
SRR5643659five period of Gastrodia elata45.890
SRR5643660five period of Gastrodia elata44.620
SRR5643661five period of Gastrodia elata40.350
SRR5643662five period of Gastrodia elata45.250
SRR5643663five period of Gastrodia elata46.910
SRR5643664five period of Gastrodia elata51.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_167.410
SRR6049655Rhizomagastrodiae_C368-T10_good_175.980
SRR6049656Rhizomagastrodiae_C368-T07_good_151.480
SRR6049657Rhizomagastrodiae_C368-T07_good_170.640
SRR6049658Rhizomagastrodiae_C368-T04_good_155.940
SRR6049659Rhizomagastrodiae_C368-T04_good_170.550
SRR6049660Rhizomagastrodiae_C368-T01_good_160.240
SRR6049661Rhizomagastrodiae_C368-T04_good_157.510
SRR6049662Rhizomagastrodiae_C368-T01_good_144.720
SRR6049663Rhizomagastrodiae_C368-T01_good_144.830
SRR6049664Rhizomagastrodiae_C368-T10_good_146.640
SRR6049665Rhizomagastrodiae_C368-T10_good_146.640
SRP279888GastroGastrodia elata tuber 26.26
JuvenJuvenile tuber58.09
Mother_GastroMother tuber of Gastrodia elata 18.37
Mother_JuvenMother tuber of Juvenile 42.17