Detail information of GWHGAAEX016328/evm.TU.scaffold_75.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00345.00E-121Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein
nrgi|743778680|ref|XP_010919807.1|9.86E-135PREDICTED: calcineurin B-like protein 1 isoform X2 [Elaeis guineensis]
Swissprottr|Q7XC27|CNBL1_ORYSJ9.00E-126Calcineurin B-like protein 1
trEMBLtr|M0U6E5|M0U6E5_MUSAM8.00E-135Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP04830_001}
TAIRAT5G471005.00E-121calcineurin B-like protein 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000072537838574980+
Transcript Sequence

Network for GWHGAAEX016328

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_71081784.20E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06268PPP3R, CNB MAPK signaling pathway map04010
Wnt signaling pathwaymap04310
VEGF signaling pathwaymap04370
Calcium signaling pathwaymap04020
cGMP-PKG signaling pathwaymap04022
Oocyte meiosismap04114
Cellular senescencemap04218
C-type lectin receptor signaling pathwaymap04625
Natural killer cell mediated cytotoxicitymap04650
T cell receptor signaling pathwaymap04660
Th1 and Th2 cell differentiationmap04658
Th17 cell differentiationmap04659
B cell receptor signaling pathwaymap04662
Glucagon signaling pathwaymap04922
Oxytocin signaling pathwaymap04921
Renin secretionmap04924
Glutamatergic synapsemap04724
Long-term potentiationmap04720
Axon guidancemap04360
Osteoclast differentiationmap04380

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms114.040
SRR2545915Juvenile tuber89.270
SRP108465SRR5643513five period of Gastrodia elata30.990
SRR5643514five period of Gastrodia elata34.500
SRR5643515five period of Gastrodia elata29.690
SRR5643524five period of Gastrodia elata30.420
SRR5643525five period of Gastrodia elata58.610
SRR5643528five period of Gastrodia elata57.930
SRR5643658five period of Gastrodia elata46.840
SRR5643659five period of Gastrodia elata41.190
SRR5643660five period of Gastrodia elata44.540
SRR5643661five period of Gastrodia elata24.910
SRR5643662five period of Gastrodia elata37.210
SRR5643663five period of Gastrodia elata39.400
SRR5643664five period of Gastrodia elata37.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.560
SRR6049655Rhizomagastrodiae_C368-T10_good_129.120
SRR6049656Rhizomagastrodiae_C368-T07_good_143.350
SRR6049657Rhizomagastrodiae_C368-T07_good_144.250
SRR6049658Rhizomagastrodiae_C368-T04_good_146.280
SRR6049659Rhizomagastrodiae_C368-T04_good_151.420
SRR6049660Rhizomagastrodiae_C368-T01_good_148.030
SRR6049661Rhizomagastrodiae_C368-T04_good_144.690
SRR6049662Rhizomagastrodiae_C368-T01_good_142.660
SRR6049663Rhizomagastrodiae_C368-T01_good_144.830
SRR6049664Rhizomagastrodiae_C368-T10_good_133.910
SRR6049665Rhizomagastrodiae_C368-T10_good_133.910
SRP279888GastroGastrodia elata tuber 52.24
JuvenJuvenile tuber52.06
Mother_GastroMother tuber of Gastrodia elata 59.11
Mother_JuvenMother tuber of Juvenile 54.96