Detail information of GWHGAAEX016331/evm.TU.scaffold_75.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672142060|ref|XP_008794880.1|1.44E-155PREDICTED: uncharacterized protein LOC103710775 [Phoenix dactylifera]
trEMBLtr|M0SS96|M0SS96_MUSAM2.00E-152Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P26340_001}
TAIRAT4G170701.00E-91peptidyl-prolyl cis-trans isomerases

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000072695028706258+
Transcript Sequence

Network for GWHGAAEX016331

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00160.20Pro_isomerase1733152.10E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0000413Biological Processprotein peptidyl-prolyl isomerization
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.510
SRR2545915Juvenile tuber20.490
SRP108465SRR5643513five period of Gastrodia elata33.240
SRR5643514five period of Gastrodia elata37.510
SRR5643515five period of Gastrodia elata30.810
SRR5643524five period of Gastrodia elata34.910
SRR5643525five period of Gastrodia elata44.220
SRR5643528five period of Gastrodia elata40.710
SRR5643658five period of Gastrodia elata49.800
SRR5643659five period of Gastrodia elata31.030
SRR5643660five period of Gastrodia elata32.180
SRR5643661five period of Gastrodia elata36.660
SRR5643662five period of Gastrodia elata28.460
SRR5643663five period of Gastrodia elata31.570
SRR5643664five period of Gastrodia elata28.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.460
SRR6049655Rhizomagastrodiae_C368-T10_good_117.260
SRR6049656Rhizomagastrodiae_C368-T07_good_134.980
SRR6049657Rhizomagastrodiae_C368-T07_good_131.450
SRR6049658Rhizomagastrodiae_C368-T04_good_126.880
SRR6049659Rhizomagastrodiae_C368-T04_good_128.630
SRR6049660Rhizomagastrodiae_C368-T01_good_132.920
SRR6049661Rhizomagastrodiae_C368-T04_good_130.380
SRR6049662Rhizomagastrodiae_C368-T01_good_134.930
SRR6049663Rhizomagastrodiae_C368-T01_good_134.030
SRR6049664Rhizomagastrodiae_C368-T10_good_135.780
SRR6049665Rhizomagastrodiae_C368-T10_good_135.780
SRP279888GastroGastrodia elata tuber 28.36
JuvenJuvenile tuber45.99
Mother_GastroMother tuber of Gastrodia elata 25.62
Mother_JuvenMother tuber of Juvenile 24.81