Detail information of GWHGAAEX016332/evm.TU.scaffold_75.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42822.00E-24Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain
nrgi|670439026|ref|XP_008659928.1|1.55E-42PREDICTED: trihelix transcription factor GTL1 [Zea mays]
Swissprottr|Q9LJG8|ASIL2_ARATH9.00E-12Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBLtr|K7VCC4|K7VCC4_MAIZE6.00E-43Uncharacterized protein {ECO:0000313|EMBL:AFW87844.1, ECO:0000313|EnsemblPlants:GRMZM2G428470_P01}
TAIRAT2G447302.00E-24Alcohol dehydrogenase transcription factor Myb/SANT-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000072758753760792+
Transcript Sequence

Network for GWHGAAEX016332

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.5Myb_DNA-bind_4211177.20E-17
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.350
SRR2545915Juvenile tuber19.950
SRP108465SRR5643513five period of Gastrodia elata29.850
SRR5643514five period of Gastrodia elata25.230
SRR5643515five period of Gastrodia elata21.230
SRR5643524five period of Gastrodia elata21.120
SRR5643525five period of Gastrodia elata43.850
SRR5643528five period of Gastrodia elata31.660
SRR5643658five period of Gastrodia elata50.380
SRR5643659five period of Gastrodia elata14.760
SRR5643660five period of Gastrodia elata15.030
SRR5643661five period of Gastrodia elata17.100
SRR5643662five period of Gastrodia elata21.600
SRR5643663five period of Gastrodia elata21.360
SRR5643664five period of Gastrodia elata39.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.600
SRR6049655Rhizomagastrodiae_C368-T10_good_170.750
SRR6049656Rhizomagastrodiae_C368-T07_good_136.310
SRR6049657Rhizomagastrodiae_C368-T07_good_147.190
SRR6049658Rhizomagastrodiae_C368-T04_good_134.370
SRR6049659Rhizomagastrodiae_C368-T04_good_137.160
SRR6049660Rhizomagastrodiae_C368-T01_good_137.340
SRR6049661Rhizomagastrodiae_C368-T04_good_131.760
SRR6049662Rhizomagastrodiae_C368-T01_good_129.320
SRR6049663Rhizomagastrodiae_C368-T01_good_129.510
SRR6049664Rhizomagastrodiae_C368-T10_good_133.060
SRR6049665Rhizomagastrodiae_C368-T10_good_133.060
SRP279888GastroGastrodia elata tuber 22.67
JuvenJuvenile tuber41.40
Mother_GastroMother tuber of Gastrodia elata 58.04
Mother_JuvenMother tuber of Juvenile 43.02