Detail information of GWHGAAEX016336/evm.TU.scaffold_75.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|430744270|ref|YP_007203399.1|4.00E-58methionine-S-sulfoxide reductase [Singulisphaera acidiphila DSM 18658]
KOGKOG16359.00E-102Peptide methionine sulfoxide reductase
nrgi|672142139|ref|XP_008794922.1|6.56E-119PREDICTED: peptide methionine sulfoxide reductase A4, chloroplastic-like [Phoenix dactylifera]
Swissprottr|Q9SEC2|MSRA_LACSA3.00E-113Peptide methionine sulfoxide reductase
trEMBLtr|I1JJ90|I1JJ90_SOYBN1.00E-116Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G46020.1}
TAIRAT4G251309.00E-102peptide met sulfoxide reductase 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007210366421084381-
Transcript Sequence

Network for GWHGAAEX016336

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01625.20PMSR1052463.40E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0008113Molecular Functionpeptide-methionine (S)-S-oxide reductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms69.000
SRR2545915Juvenile tuber53.740
SRP108465SRR5643513five period of Gastrodia elata64.010
SRR5643514five period of Gastrodia elata59.760
SRR5643515five period of Gastrodia elata57.250
SRR5643524five period of Gastrodia elata57.700
SRR5643525five period of Gastrodia elata121.260
SRR5643528five period of Gastrodia elata93.440
SRR5643658five period of Gastrodia elata129.380
SRR5643659five period of Gastrodia elata56.830
SRR5643660five period of Gastrodia elata66.060
SRR5643661five period of Gastrodia elata67.540
SRR5643662five period of Gastrodia elata88.670
SRR5643663five period of Gastrodia elata84.370
SRR5643664five period of Gastrodia elata98.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_159.560
SRR6049655Rhizomagastrodiae_C368-T10_good_150.660
SRR6049656Rhizomagastrodiae_C368-T07_good_166.420
SRR6049657Rhizomagastrodiae_C368-T07_good_171.000
SRR6049658Rhizomagastrodiae_C368-T04_good_168.810
SRR6049659Rhizomagastrodiae_C368-T04_good_167.120
SRR6049660Rhizomagastrodiae_C368-T01_good_161.980
SRR6049661Rhizomagastrodiae_C368-T04_good_160.630
SRR6049662Rhizomagastrodiae_C368-T01_good_150.670
SRR6049663Rhizomagastrodiae_C368-T01_good_152.850
SRR6049664Rhizomagastrodiae_C368-T10_good_158.270
SRR6049665Rhizomagastrodiae_C368-T10_good_158.270
SRP279888GastroGastrodia elata tuber 66.64
JuvenJuvenile tuber56.00
Mother_GastroMother tuber of Gastrodia elata 59.54
Mother_JuvenMother tuber of Juvenile 37.86