Gene detail

Detail information of GWHGAAEX016340/evm.TU.scaffold_75.28

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1837	5.00E-161	Uncharacterized conserved protein
nr	gi\|672165199\|ref\|XP_008802496.1\|	0	PREDICTED: uncharacterized protein At3g06530 [Phoenix dactylifera]
Swissprot	tr\|Q9C8Z4\|HEAT1_ARATH	0	Uncharacterized protein At3g06530
trEMBL	tr\|I1J0B1\|I1J0B1_BRADI	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI5G17540.1}
TAIR	AT3G06530	5.00E-161	ARM repeat superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000072	1229455	1310153	+

Transcript Sequence
>GWHTAAEX016340 GCCAAATCTCAAACTGCCGTCTCTTTCTCACACGAAGCGTCAACCCTAATCCTCCCCTTCTTCTTCTCCTTCGGCACAGAGAAGGCTCGCCGAACCCTAAAATCTTCTAACATACGAGCAGAGGAAAATGTCCATTAATTCTACTCTCAAAGTCTAGTCTGCTATCGTCAGTCTCACCGGCGTCGCCAAGCTGACACCATCGGTGGGAGCGCAACACCTCTGCCTGCCTTTGGGACTTACGCCATTAAGGCAACCATGTCAATTGCATCTCAGCTTCAGGCTATCAAATCCGTTATCAAGGGAAAAGAGGATTTGATCCGCAGGCCCATTACTCGCCCTTCTGTTCTCTTTGACCCCAAGGATGCTGCTGATATCGATTTAAGATCGATTCTTCCATTAGCACAGTCCGGTTTGGATGCCCTTATAGAGGTGGATGATCGATTTTTGGGCTACAAGTCCACTCTTTTTAGCCATGCAACTCTTGAAATTGATAGGGACAAGATGACCCCTAAAGAAGAGGCCAAGCTGAACAATTCAATATGCTCATATCTACAGCTGCTTTCAGGACAACTGCATCTTCCATCTGCCTTCAGAACCATGGAGTATCTCATTCGTAGATACCAAGTTCATATTTTCAATGTTGAGGAGCTTGTTTTATGCGCACTACCTTATCATGACACCCATGGCTTTGTCCGGATTATCCAATTGATGAATTTTGGAAACAAAAAGTGGGCATTTCTGGAGGGTGTGAAAACATCTGGTGCAACACTTCCTAGAAAGCTTATAGTGCAACAATGCATTCGTGATAAAGGAGTTTTGGAGGCCTTATGCAACTATGCATCTCCAAGTAAATATTTCCTGCATTCAAGACCAGTCATTTGCTTTTGCACTGCAGTAATTGTGGAAATGCTTGGTTCTCTTCAAAAGCTTGACACGGATACTATACAAAAAATCCTATCCTTTGTATTCAATGGTCTTAATCCTGCTGTGGGTGGAAGTTCTGATCATGTGGCAGGCGCACTAATGGTTGTGGGTTTGCTTGCATCTAGAGCTGCATTGGCATCCAAACTTGTTCAAAACTTAGTTTTTTTTCTTGCACGGCTTGCTCAACATGATGCAAAAAATTTGTCTGATATGCCAAGGCTTCGTCTTGCAATTATGACCATAGTTACCCTTGTGCAGTCTCAATCGTCACAAGTCTTTCCAAAGAAGACAATGATGATGCTGAAGGAAATACGGGATTTTATTGGCATACTATCTGGTTTGTCCCAAGAATTCAATACAAGGAAGTTTGTGCATCTTTACATTGAATCTCTAATTGAGTACAGTTTGTCTGATGACTGCTGTTGTCGTTTACTTCTAAATACCTTGGAAGTACTTCCTGTCAATGATTTTGTGGAAAATATCGTGCATAAAATTCTTGGAAAATGTATCAAATTTTTAAATACAGACTATGCAGATTCAAGTGCAGCAGGTATCCGGGTTAAGCAAATTTTGGTCAAGCTAAATAAGCAATATCAGTCTGAATTGCGGGGAGCTGTTCATAAATTTATTGAGAACCCAAAATGGAAGTTTGGAGAGGAGAATTCTGCTTTTTTAGTTTTATGTCAGTTGCTTGATGAAAACTCGGACATGCCAATGAAACTTTCTGATGCAAACATTTGGTTTTCTCTGGAGCATCCCAAGGCTGGTGTACGTCGAATTACTCTTCTAGATTTAGCATCATCTGGTAAATTAGAATCCTTTGCTGACAATCCATCGAAACTTATTAACTATGAAGATGCTATAATCCGTCGGCTGTTAGATGAAGATCTTACTGTTGTACATGCAGCATTATCTGTTAAAGAACTTTCCAAAATTGTTAGTCCACCATTGCTTCTCAAGACATATCATGATGTGTTTCTGAGGTGCATGAATGTACTTAAAAAAGATACTGAAATGTTATCTCAAGCCTGTGATATTATGGTATTGTGTCTTAACCATATGGTTGTGGACAATGCATTGCACCAAAATGAATTTGTTATGGAAGTTGCAGAAATAATATTTCCTATTCTTCTTATTCTACCTCAGACTTGTAGAGTGAATGTAAAAGCTTTGAAGGTTGTTAAGAACTTGCAATGGTCGTTTTACTCCGCCTTCAAAACATGTGATTTAGATTTTGTTGAGCATCAAGTAAAGAAATTAGACCATGAGCAGATGACTACCAATAACATTCGGACAATTCAATTATTGGCTGCAATATTTGCTGGGAATCCTCTAGATCATTTTGAGTGGTTGGTTAAATGTAGCAGTCAAAGCAATTTAGCAAAATGTTTTTTCTTCTTCATCATTCTTCAATCTTTGGTTATATGCAAAGAAGAAACTGGCAAATTATGGAGGCTTCTTGGAGCATGCTTTGTAGCTGTTAAAAATTGGTGGTATGAAATGATAGTTGCCAAAAATGTTGTGTTTGCTACAAAGTTTCTCAGTGACGAGTGGTGTGAAGTGCAATCTCAGGGCGATGCTTTTATTACTGGAGAGTTAAATTTGGAGATATTTGATAAATCGTATAGGCGATTAGTTAAGCAACTGTTGCATCACAATGTTGACATGTTAAGTGAAAAGATACTTATTTGCATAAATTGGTGTTTGCTGGAAATATGCTCTGGTGTATCTCGAAGAAACAAGTTTGTGGAGGATCAACAACTTGTGCTATTTGATGAGCTGTTTCTATTTTTTGCCTCATCAAGTTTGAGTATCTTCAAGAAACAACTTCCATTTGTTGTTATAAATTGCTGCAAATCACCATTTCAATTTCTAACCAAATATTTTGTTGAAGAAGGTTTTTCTGCTGCTGTTCAAGTTGATACTTTATTCTCATTTGCTTCTATCTGTTTCGTGTATGCGTCAGATTGGATATTAACAAATGAAAACACTCTTCAGTCGCTTTTAGTATTTCCTTCCCTACTTGTACCTCTTACCAATGATGACAAGGAAATTCGCACTGCTGCTCTAAACTGCATTGAAGGAATATACAAGATGTGGCAGTGCTTTGATGTTTCCTGCTTGAAGAATGGGAATGATGCAATGTTTCTGCAATGTGTAACTTCATCAAAATTTGGAGATTTTCTAGAGTCTTTTCTTAATCAAAAGCTTCTGATTTCATCAGATGTGAATTTTCTTCCATCATTTGTGACTTCATTGTTAAGCTCATCGAGTGACAGCCTTCTTGTGCCAGATAATTGCTATAAAAGGCTAGACCAATCATCTAAGGATGCCATACTGCTGTTCATTTTGACTTCAGCATTGAAGTTTCCATCATATGGAAAGCATAAGATACTTTGTTTGCTTAAAGCTATGGGCAAAACGTTGCTACAAATGGATGGATGCAAAGAGTTGCTTCTAGAGCTTCTGAAAAAACGTGAGGAGTACTACACTGAGGCTGGGGTGCTACACGGTAGGCTATCAAAATATGAGATTGAAACACTGTGCTTACTTTTAGAGCTTTGTGCGCTGCAATCTTGTTCTTTTATCGATGATGTCGGTGTAAGTTGTCTTGTGAAAGTTTTGAAAATTGACGGTTTGCCATTGAACGAATCTGCCGTTGTAAAACCATGTGTTACTGTCTTGAAAAATCTGCGATGCTCCTTTTACAGCAACTTGAATAGCAATTTACAGGATGAAATATTCATAAGTCTAGTATTTTTGTTCCGGTGTAACAATGGAGATTTGAGAAATGCTGCAAGAGATTTGGTTCTAAACCTTAATATAAATTGTGCAACAGTTGCAAGATTCCTCGAAGAAATTTTGTACAATGACCGTCTTGTTAACTCTCCAAGAAAATCAAGGAAACATCAAGTTATCACTTCAAAAAAATCTGATACTTGTAAAGATATGGTAGCGGTCGGAGAGAAAGCTATTTTTGCATTGGGCTCATTGCTTGAAATTTTGTTGCTTAAGAAAGATTTAGTCAATAGAGTTTCTCTGGTGGAACCATTGTTTGTGGCCCTAGACAAATTTTTCTCAAATGATTGGCTTCTTGGTTTATTGCCTAACTCATCAAAAAATGAATCTGGATCTGGTTTTTCTGAATTATTTTCAGCTCTTCTTTATTCTGCACAACATTCTATCCTAATAATCCTCAAGGATATTGTTGACTCAAATATTGTGGGACATCCTGATAATGATAATTTATGTGATAAGCTTAATATAAATCTTCTGGTTGAGTGTGCACACTCAGCTAAGGATGTTACCACCCGCAATCACATTTTTTTGTTACTTTCTTCTATTGCCAAGATCTCTTCTGGGCAGCTTTATGAACATATTATTGAGTTATTTGTCATAGTTGGAAAATCTGCCCTAAAACAGAAGGACCAGCACTCGCAACAAGTTTTGGAGAATCTGATATCAGCGCTGGTCCCTTTTTGGTTAGCTAAAACAAACAGTGCTGGGAAGTTGTTTCAGATTTTCTTAAAAGGTTTGCCTGATATTGCGGAAGAACGGTGGATACCTGTCTTGGTGTATCTTGTCAGGACTTTGGGAGAGAAGGATAGTTTGGGCATACTATTTTATCAGCTTTTCCATTCATTGAGTCTGCGACTTGATATGACTTCTCATTATTCTGAAGCTGTTCTTCATGATTTGCTGTCTACGTCATCTCTGATTTTCAAGGAATTTGAATACAGGATCGCATTACAACTATGTAATCAGTATTCTATTAAAATATGGCTTCCTTCTCTAGTACAGATGTTGCAAGAGATTGAACTTTGCAGCAAACAACAAAAAATTTTTCCTGAGCTAGTTTTGGCGTTGCAGTTTATACTCTGCAAATTAAAAGACACTGAGTTTGCTTTTGAGCTTGAATCTGGGCGAGATTCTAGTTATGTTCAGGCTCCACTCGGGGTACTTATGGAGCAGGTTATACTGCACTCACATCTTCTTGGTAATGGGTGCAAACAACTTGGCTTCTCTAAGCAAATTTCAAAGGAAGCAAGAAAGTGCATCAGCCAAATTCTCAAGAGCCTAACAACGTATATGAATCCTGATACATTTTTCAAATGTATTGTCCAGTTACTTGGAAATGATGATTGCAATGTAATTGAAAAGACCCTTGATTTTTTATGCGAGTCTATCAAAGATTATGTACGTTATCCAAAGGACAAGGAGATAACAAAAAAAAAAGGGAGAACTGCTGCTTTCAAACTACAGATCACTGCTCCTATTATGCCATCTTTCATTGAGCTATGCTTTAAAATTAATCAGCTAATTTCAAGTCACTCACTACACATTGCAGTGCAGTTAGCAGCAATCTCGTCTATTGAAACTTTGGCATTGGAGCTGCCTTGTGATGAACCAATTTTTGGTACATGCCTTCAATGTGTTGTGGGCAAAATAGAATCTTCTGATTTGGCTCTTTCATCTGCTTGTATTCGTTGTGTGGCTGCATTGGTTGGAGTACTGGGTTCTCATGCTCTTAAGTTTCTTCCTTGCATTATGACACAGGTTCTTAAAAAGGCTCATGAAGTTTCCAAATGTTCTTACATAACTTATCGGCAGAGTACAAATGAAGTTGAAAGTTTTAAAGCGCCTGTTTTGCTGTCTACTCTCTCTGCATTGGAGGCAGTTATAACAAATCTTGGTGGATTTTTAAATCCATATCTTGATGACATCTTGGATGTCATCATCCTTCATTCTGATTTTATATCAGATCTAGATCTTAAGATAAAGACAAAAGCTATTACTGTACGGAAACTTCTGACTGAGAAAATTCCTGTGCGCCTTTTGCTTCCGCCTTCTCTACGAGTTACTGAAACAGCTCTTAGATGTGGTGAAACAAGCTTATCTTTGGTTTTTGAGATGCTTGAAAACATGATTGGCGGAATGGATAGGTCTTCTATAGCCTCTTTTCATGTGAAAATATATGAACAATGTTTGGCCTCACTTAATATTCGCCATCAAGTCCCAGAATCAATTAAAGACATCAATATGGTGGAGCAGAGTGTTATTCAAACCATGGTTGCTTTGACAATGAGATTGACGGAGACTATGTTTAAGCCATTGTTTTTTCACAGTCTGGAATGGGCAGAGTTAGAACTAGAAGATAATCAGTCAACTAAAAGCATAAGCATTGATCGATCAATTTCATTCTACAGTTTAATAAATAAACTTGTTCAGAAACACAGATCCCTCTTTGTACCTTACTTCAAGTATTTGCTTGGGAGCTGTACACAATTTCTAACTCAAGATGGTAAAGTAGATTACAATTTTCAAACTCAGAAGAGAAAAAAAGCTAAAACCCAAGATTCATGTACCAATGTAAACCCTTTAGCTGCTGTCTCCACAAAATTGTGGCATTTGAGAGCTCTTATTCTGAAGGCACTCTATCATTGTTTCCTTTTCGATACAGCAGACACTAAATTTTTGGATGCTGCAAACTTCCAGGTTCTATTGAAACCCATCATTTCACAGCTTAATATTGAACCACCTGCCTCGTTAAATTGTCCCCCAGATGTGCCCACCGTTGATACTGTTGACGAATGCTTGGTTTTATGTTTGGGACAAATGGCTGTTGCTGCTAAATCTGACGTTCTATGGAAGCCACTTAACCATGAGGTTCTTATGCAAACAAGGAACAAGAAGATCCGACCAAAGATACTCAGTCTAAGGGTGATTAAATACTTGGTGGAACACCTGAGAGAGGAGTATTTAGTTTTCCTGCCCGAGACAATTCCTTTCTTGGGTGAACTTCTTGAAGATGTTGAGCTTTCTGTGAAAACACTGGCACAGGTGATTCTCAAGGAGATGGAGGTTCTCAGTGGTGAAAGCCTGAAGCAATATCTGTGATAGGGAAGAAGGCCTCTGGTTTACACTATCAACAATTTTGATGATATAAAAGCATATTCTTTCTTCTGTTTGAAGACACAAGAAGGAAATTTTGTGACACTTTCCTTAAAGATGATGATGCTGCAAAGCAATTTGAAAAGGACAGTGCAGAATTTTATGTGCATCAGAGATTGAATTCTCAGAACCATAGCTATCTATGGCGTCATTTGGAAAATCTATCTCTTCCGATCGACATGTGATATTTAACAAGTCTTTATTTCATGGTCTTTGCCACAGCAGAACTGCTGTTATTTAACTAAAAAGTTGCTGTTTATTTTGGTCTGTAAATTAGTTTACTATTTAAAGTGACCAAAGCCATTTTAAAAAGGCTTGCTAATTATGCACTTCCAAAGTGGGCCTTTCAAAATTTGAAATAAATAGTGGATTGTGAGGAAAAAATATACCCTTCTAATTTCATTGTTTGCAGCGAATGTTTGTATTATCCTAACCCATAACATTTGTCATTATGATTATCATCACTTCCATCATCATGATC

Network for GWHGAAEX016340

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12397.7	U3snoRNP10	230	354	1.60E-16
PF08146.11	BP28CT	1874	2044	1.40E-36

Protein Sequence

>GWHPAAEX016340
MSIASQLQAIKSVIKGKEDLIRRPITRPSVLFDPKDAADIDLRSILPLAQSGLDALIEVDDRFLGYKSTLFSHATLEIDRDKMTPKEEAKLNNSICSYLQLLSGQLHLPSAFRTMEYLIRRYQVHIFNVEELVLCALPYHDTHGFVRIIQLMNFGNKKWAFLEGVKTSGATLPRKLIVQQCIRDKGVLEALCNYASPSKYFLHSRPVICFCTAVIVEMLGSLQKLDTDTIQKILSFVFNGLNPAVGGSSDHVAGALMVVGLLASRAALASKLVQNLVFFLARLAQHDAKNLSDMPRLRLAIMTIVTLVQSQSSQVFPKKTMMMLKEIRDFIGILSGLSQEFNTRKFVHLYIESLIEYSLSDDCCCRLLLNTLEVLPVNDFVENIVHKILGKCIKFLNTDYADSSAAGIRVKQILVKLNKQYQSELRGAVHKFIENPKWKFGEENSAFLVLCQLLDENSDMPMKLSDANIWFSLEHPKAGVRRITLLDLASSGKLESFADNPSKLINYEDAIIRRLLDEDLTVVHAALSVKELSKIVSPPLLLKTYHDVFLRCMNVLKKDTEMLSQACDIMVLCLNHMVVDNALHQNEFVMEVAEIIFPILLILPQTCRVNVKALKVVKNLQWSFYSAFKTCDLDFVEHQVKKLDHEQMTTNNIRTIQLLAAIFAGNPLDHFEWLVKCSSQSNLAKCFFFFIILQSLVICKEETGKLWRLLGACFVAVKNWWYEMIVAKNVVFATKFLSDEWCEVQSQGDAFITGELNLEIFDKSYRRLVKQLLHHNVDMLSEKILICINWCLLEICSGVSRRNKFVEDQQLVLFDELFLFFASSSLSIFKKQLPFVVINCCKSPFQFLTKYFVEEGFSAAVQVDTLFSFASICFVYASDWILTNENTLQSLLVFPSLLVPLTNDDKEIRTAALNCIEGIYKMWQCFDVSCLKNGNDAMFLQCVTSSKFGDFLESFLNQKLLISSDVNFLPSFVTSLLSSSSDSLLVPDNCYKRLDQSSKDAILLFILTSALKFPSYGKHKILCLLKAMGKTLLQMDGCKELLLELLKKREEYYTEAGVLHGRLSKYEIETLCLLLELCALQSCSFIDDVGVSCLVKVLKIDGLPLNESAVVKPCVTVLKNLRCSFYSNLNSNLQDEIFISLVFLFRCNNGDLRNAARDLVLNLNINCATVARFLEEILYNDRLVNSPRKSRKHQVITSKKSDTCKDMVAVGEKAIFALGSLLEILLLKKDLVNRVSLVEPLFVALDKFFSNDWLLGLLPNSSKNESGSGFSELFSALLYSAQHSILIILKDIVDSNIVGHPDNDNLCDKLNINLLVECAHSAKDVTTRNHIFLLLSSIAKISSGQLYEHIIELFVIVGKSALKQKDQHSQQVLENLISALVPFWLAKTNSAGKLFQIFLKGLPDIAEERWIPVLVYLVRTLGEKDSLGILFYQLFHSLSLRLDMTSHYSEAVLHDLLSTSSLIFKEFEYRIALQLCNQYSIKIWLPSLVQMLQEIELCSKQQKIFPELVLALQFILCKLKDTEFAFELESGRDSSYVQAPLGVLMEQVILHSHLLGNGCKQLGFSKQISKEARKCISQILKSLTTYMNPDTFFKCIVQLLGNDDCNVIEKTLDFLCESIKDYVRYPKDKEITKKKGRTAAFKLQITAPIMPSFIELCFKINQLISSHSLHIAVQLAAISSIETLALELPCDEPIFGTCLQCVVGKIESSDLALSSACIRCVAALVGVLGSHALKFLPCIMTQVLKKAHEVSKCSYITYRQSTNEVESFKAPVLLSTLSALEAVITNLGGFLNPYLDDILDVIILHSDFISDLDLKIKTKAITVRKLLTEKIPVRLLLPPSLRVTETALRCGETSLSLVFEMLENMIGGMDRSSIASFHVKIYEQCLASLNIRHQVPESIKDINMVEQSVIQTMVALTMRLTETMFKPLFFHSLEWAELELEDNQSTKSISIDRSISFYSLINKLVQKHRSLFVPYFKYLLGSCTQFLTQDGKVDYNFQTQKRKKAKTQDSCTNVNPLAAVSTKLWHLRALILKALYHCFLFDTADTKFLDAANFQVLLKPIISQLNIEPPASLNCPPDVPTVDTVDECLVLCLGQMAVAAKSDVLWKPLNHEVLMQTRNKKIRPKILSLRVIKYLVEHLREEYLVFLPETIPFLGELLEDVELSVKTLAQVILKEMEVLSGESLKQYL

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14550	UTP10, HEATR1	Ribosome biogenesis in eukaryotes	map03008

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	50.590
SRP064423	SRR2545915	Juvenile tuber	38.200
SRP108465	SRR5643513	five period of Gastrodia elata	16.030
	SRR5643514	five period of Gastrodia elata	17.840
	SRR5643515	five period of Gastrodia elata	16.980
	SRR5643524	five period of Gastrodia elata	18.130
	SRR5643525	five period of Gastrodia elata	10.480
	SRR5643528	five period of Gastrodia elata	9.880
	SRR5643658	five period of Gastrodia elata	9.480
	SRR5643659	five period of Gastrodia elata	19.210
	SRR5643660	five period of Gastrodia elata	19.460
	SRR5643661	five period of Gastrodia elata	18.130
	SRR5643662	five period of Gastrodia elata	14.840
	SRR5643663	five period of Gastrodia elata	16.710
	SRR5643664	five period of Gastrodia elata	16.500
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.460
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.270
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.440
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	19.170
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	22.500
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	27.870
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.010
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	24.160
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	25.410
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	28.130
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	19.450
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	19.450
SRP279888	Gastro	Gastrodia elata tuber	33.64
	Juven	Juvenile tuber	22.33
	Mother_Gastro	Mother tuber of Gastrodia elata	20.58
	Mother_Juven	Mother tuber of Juvenile	24.42