Detail information of GWHGAAEX016346/evm.TU.scaffold_75.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29182.00E-141Carboxymethyl transferase
nrgi|743863923|ref|XP_010943903.1|0PREDICTED: tRNA wybutosine-synthesizing protein 4 isoform X1 [Elaeis guineensis]
trEMBLtr|A0A061DUQ6|A0A061DUQ6_THECC0Leucine carboxyl methyltransferase isoform 1 {ECO:0000313|EMBL:EOX96465.1}
TAIRAT1G021002.00E-141Leucine carboxyl methyltransferase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007216233801693679+
Transcript Sequence

Network for GWHGAAEX016346

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04072.13LCM202122.80E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0032259Biological Processmethylation
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.190
SRR2545915Juvenile tuber39.530
SRP108465SRR5643513five period of Gastrodia elata23.270
SRR5643514five period of Gastrodia elata20.210
SRR5643515five period of Gastrodia elata20.500
SRR5643524five period of Gastrodia elata19.040
SRR5643525five period of Gastrodia elata18.120
SRR5643528five period of Gastrodia elata14.000
SRR5643658five period of Gastrodia elata16.060
SRR5643659five period of Gastrodia elata28.990
SRR5643660five period of Gastrodia elata32.560
SRR5643661five period of Gastrodia elata34.830
SRR5643662five period of Gastrodia elata35.900
SRR5643663five period of Gastrodia elata32.240
SRR5643664five period of Gastrodia elata33.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.540
SRR6049655Rhizomagastrodiae_C368-T10_good_121.470
SRR6049656Rhizomagastrodiae_C368-T07_good_121.700
SRR6049657Rhizomagastrodiae_C368-T07_good_129.090
SRR6049658Rhizomagastrodiae_C368-T04_good_124.940
SRR6049659Rhizomagastrodiae_C368-T04_good_127.460
SRR6049660Rhizomagastrodiae_C368-T01_good_122.740
SRR6049661Rhizomagastrodiae_C368-T04_good_125.410
SRR6049662Rhizomagastrodiae_C368-T01_good_121.470
SRR6049663Rhizomagastrodiae_C368-T01_good_119.770
SRR6049664Rhizomagastrodiae_C368-T10_good_122.070
SRR6049665Rhizomagastrodiae_C368-T10_good_122.070
SRP279888GastroGastrodia elata tuber 32.01
JuvenJuvenile tuber29.90
Mother_GastroMother tuber of Gastrodia elata 13.86
Mother_JuvenMother tuber of Juvenile 20.63