Detail information of GWHGAAEX016349/evm.TU.scaffold_75.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10120Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain
nrgi|743829215|ref|XP_010934086.1|0PREDICTED: synaptotagmin-4-like isoform X1 [Elaeis guineensis]
Swissprottr|Q8L706|SYT5_ARATH4.00E-94Synaptotagmin-5
trEMBLtr|W1NLZ4|W1NLZ4_AMBTC0Uncharacterized protein {ECO:0000313|EMBL:ERM96541.1}
TAIRAT3G610500Calcium-dependent lipid-binding (CaLB domain) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007218520421905402-
Transcript Sequence

Network for GWHGAAEX016349

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17047.4SMP_LBD682471.10E-19
PF00168.29C22633605.90E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008289Molecular Functionlipid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms55.580
SRR2545915Juvenile tuber65.780
SRP108465SRR5643513five period of Gastrodia elata60.610
SRR5643514five period of Gastrodia elata73.280
SRR5643515five period of Gastrodia elata66.190
SRR5643524five period of Gastrodia elata70.530
SRR5643525five period of Gastrodia elata45.880
SRR5643528five period of Gastrodia elata37.570
SRR5643658five period of Gastrodia elata45.760
SRR5643659five period of Gastrodia elata68.200
SRR5643660five period of Gastrodia elata75.340
SRR5643661five period of Gastrodia elata67.770
SRR5643662five period of Gastrodia elata82.870
SRR5643663five period of Gastrodia elata81.090
SRR5643664five period of Gastrodia elata84.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_175.780
SRR6049655Rhizomagastrodiae_C368-T10_good_1107.900
SRR6049656Rhizomagastrodiae_C368-T07_good_174.500
SRR6049657Rhizomagastrodiae_C368-T07_good_170.280
SRR6049658Rhizomagastrodiae_C368-T04_good_162.710
SRR6049659Rhizomagastrodiae_C368-T04_good_171.170
SRR6049660Rhizomagastrodiae_C368-T01_good_167.010
SRR6049661Rhizomagastrodiae_C368-T04_good_165.390
SRR6049662Rhizomagastrodiae_C368-T01_good_162.110
SRR6049663Rhizomagastrodiae_C368-T01_good_163.450
SRR6049664Rhizomagastrodiae_C368-T10_good_183.880
SRR6049665Rhizomagastrodiae_C368-T10_good_183.880
SRP279888GastroGastrodia elata tuber 58.13
JuvenJuvenile tuber53.20
Mother_GastroMother tuber of Gastrodia elata 54.45
Mother_JuvenMother tuber of Juvenile 39.30