Detail information of GWHGAAEX016353/evm.TU.scaffold_75.45_evm.TU.scaffold_75.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374287586|ref|YP_005034671.1|7.00E-19putative antibiotic modification-related protein [Bacteriovorax marinus SJ]
KOGKOG27872.00E-174Lanthionine synthetase C-like protein 1
nrgi|695026033|ref|XP_009400289.1|0PREDICTED: lanC-like protein GCL2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q8VZQ6|GCL2_ARATH0LanC-like protein GCL2
trEMBLtr|M0SXT2|M0SXT2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P12030_001}
TAIRAT1G529202.00E-174G protein coupled receptor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007221496772184917+
Transcript Sequence

Network for GWHGAAEX016353

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05147.12LANC_like654042.70E-92
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.590
SRR2545915Juvenile tuber24.760
SRP108465SRR5643513five period of Gastrodia elata44.510
SRR5643514five period of Gastrodia elata54.380
SRR5643515five period of Gastrodia elata45.930
SRR5643524five period of Gastrodia elata59.810
SRR5643525five period of Gastrodia elata17.590
SRR5643528five period of Gastrodia elata20.660
SRR5643658five period of Gastrodia elata13.610
SRR5643659five period of Gastrodia elata19.000
SRR5643660five period of Gastrodia elata17.660
SRR5643661five period of Gastrodia elata18.110
SRR5643662five period of Gastrodia elata15.530
SRR5643663five period of Gastrodia elata18.870
SRR5643664five period of Gastrodia elata17.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_144.560
SRR6049655Rhizomagastrodiae_C368-T10_good_126.870
SRR6049656Rhizomagastrodiae_C368-T07_good_147.330
SRR6049657Rhizomagastrodiae_C368-T07_good_137.780
SRR6049658Rhizomagastrodiae_C368-T04_good_149.750
SRR6049659Rhizomagastrodiae_C368-T04_good_147.430
SRR6049660Rhizomagastrodiae_C368-T01_good_146.580
SRR6049661Rhizomagastrodiae_C368-T04_good_148.950
SRR6049662Rhizomagastrodiae_C368-T01_good_168.790
SRR6049663Rhizomagastrodiae_C368-T01_good_166.120
SRR6049664Rhizomagastrodiae_C368-T10_good_146.520
SRR6049665Rhizomagastrodiae_C368-T10_good_146.520
SRP279888GastroGastrodia elata tuber 18.72
JuvenJuvenile tuber32.98
Mother_GastroMother tuber of Gastrodia elata 38.99
Mother_JuvenMother tuber of Juvenile 30.06