Gene detail

Detail information of GWHGAAEX016361/evm.TU.scaffold_75.55

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|330469195\|ref\|YP_004406938.1\|	7.00E-07	methyltransferase [Verrucosispora maris AB-18-032]
nr	gi\|743778767\|ref\|XP_010919849.1\|	0	PREDICTED: probable methyltransferase PMT2 [Elaeis guineensis]
Swissprot	tr\|B9DFI7\|PMT2_ARATH	0	Probable methyltransferase PMT2
trEMBL	tr\|I1K108\|I1K108_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G06050.3}
TAIR	AT1G26850	0	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000072	2407284	2444174	-

Transcript Sequence
>GWHTAAEX016361 ATGGGTGAAGCAGGTGCATGGAAGAAGAGTGATATTGGGAGGGGAGATAGCATTGCGTTAAAGATAATTCGGGAAACAGAGTATGGTGTCTTGCCAAATTTGAACTTTGAAACCCATCATAGCAATGATGTTAGCATCTACACTTCTAAAGCCAAAGCGTTTTCTCAATGCGATGCCGCTCTGGCAGATTACACACCATGTCATGATCCAAATCGAGCAATGGCCTTTCCTAGGGAGAATATGGCTTATAGAGAAAGGCATTGCCCTCCCAAGAAAGACAAATTGCGATGCCTTATTCCGGCTCCAAAAGGTTACATGACACCTGTTATTTGGCCAAAGAACCGTGACTATGTTCCTTATGCAAACGTTCCATATAATAGTCTAGCAGTTGAGAATGCTGCTCAGAACTGGGTTCAGCTTGAGGGTAATTTTCTTAAATTTTCTGGAGGAGGGACTATGTTTCCTCAAGGGGCAGATGCTTATATTGATGAGCTTGCCGCTGTCATCCCACTTGCTGATGGAACAATCAGAACGGCCCTGGACGTAGGTTGTGGGGTTGCAAGCTGGGGAGCATATCTGTTTAAACGTAATGTATTAACGATGTCCTTTGCACCAAGGGATTCTCATGAAGCTCAAGTGCAGGTTGCCTTGGAAAGAGGTGTTCCTGCAGTTATAGGAGTACTTGGGACTATTAAGCTTCCATATCCATCCAGAGCTTTTGATATGGCTCATTGTTCTCATTGTACAGTAAAATGGACTTCAAACGAGGGAATGTACATGATGGAAATAGATAGAGTTCTCAGACCTGGCGGATACTGGATACTATCGGGGCCGCCCATTAATTGGATGGTATATCATAAGACAGGGAAGCTTTTGGCGGAGGATCTTCAGAAGGAACAAAAAAGAATAGAGGATCTGGCTGACCTTCTTTGCTGGGAGAAGAAGTATGAGAAAGGAGATATTGCCATCTGGAAGAAAAAGATAAATGACTACTCTTGTAAAAGAAAAAATAAATCTTCTGTTGGGATGTGTAGAACCGACCATGTTGAGAATTTATGGTACCAAATGATGCAAGTTTGCATAACCCCTTTCCCTACAGTAAAGACTTTAAATGAAGTCGCTGGTGGGAACTTGAAAAGGTTCCCGGATCGGCTCTATGCCATTCCTCCCAGTATATATGGCGGATCTTTCCCGGGGTTTCTCAAGGAGGCTTTCGAAGAAGATAACATCCTTTGGAAGAAGCATGTCAACGCTTACAAGAAGATGAACAAACAACTGATCGGCTCAGGAAAGCATCGGAACATAATGGATATGAATGCAGGCTTTGGAGGTTTTGCGGCTGCGTTTGAGCCCTCCAGCTCTTGGGTGATGAATGTCGTCCCTACGATATCTCTGAAAGACACTTTGGGGGTGATTTATGAGCGAGGCCTGATTGGAATATACCATGACTGGTGTGAAGCCTTCTCCACGTACCCCAGATCATATGATTTGATTCATGCAAATGGCGTCTTCAGCTTGTATCAAGACAAGTGTGGAATGGAAGACATACTTGTGGAGATGGACAGAATACTGCGGCCTGAAGGCGTGATCGTAGTCAGAGATAGCGTTGATTCTGTGATAAGGGTGAGAGTGCTGGCTGCCGGAATGCGCTGGAAGATGAGGATACTTGACCACGAAGATGGCCCTCTTGTGCCCGAGAAGATCTTGATTGTTGTCAAGTCTTCTTATTGGTCTGTGCCCGGGAACAATTCTGCTCCATCACTTCTTTAA

Network for GWHGAAEX016361

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03141.15	Methyltransf_29	63	573	6.40E-216

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008168	Molecular Function	methyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	30.310
SRP064423	SRR2545915	Juvenile tuber	24.920
SRP108465	SRR5643513	five period of Gastrodia elata	28.140
	SRR5643514	five period of Gastrodia elata	30.090
	SRR5643515	five period of Gastrodia elata	27.630
	SRR5643524	five period of Gastrodia elata	26.210
	SRR5643525	five period of Gastrodia elata	42.880
	SRR5643528	five period of Gastrodia elata	37.610
	SRR5643658	five period of Gastrodia elata	39.270
	SRR5643659	five period of Gastrodia elata	27.850
	SRR5643660	five period of Gastrodia elata	33.560
	SRR5643661	five period of Gastrodia elata	25.240
	SRR5643662	five period of Gastrodia elata	28.000
	SRR5643663	five period of Gastrodia elata	34.450
	SRR5643664	five period of Gastrodia elata	35.460
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	54.980
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	37.280
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	44.490
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	40.970
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	50.510
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	49.850
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	37.630
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	38.940
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	58.200
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	59.730
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	65.200
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	65.200
SRP279888	Gastro	Gastrodia elata tuber	21.79
	Juven	Juvenile tuber	18.93
	Mother_Gastro	Mother tuber of Gastrodia elata	29.38
	Mother_Juven	Mother tuber of Juvenile	11.79