Gene detail

Detail information of GWHGAAEX016367/evm.TU.scaffold_75.63

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743825616\|ref\|XP_010933069.1\|	PREDICTED: uncharacterized protein LOC105053558 [Elaeis guineensis]
trEMBL	tr\|M0U977\|M0U977_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP14680_001}
TAIR	AT3G60850	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000072	2679957	2684470	-

Transcript Sequence
>GWHTAAEX016367 GCGCCAGAATGTACTCCAGGCTAACAGATTGAGCTGTCAACCCCATCGATTGGCCGTGTGCGGTCCCATATTGGGGCTTTAGCTTCTTCCAATAGGGCAAGCCGGTCCAATCGCATTGGGAAGCCTCATTCAGAGCTTCCACAAAGAAAAAGAGCGGTAAAGAGGGAGGAGACTAGGAAGAAGACGAGGCGAAGGACGAGTGAAGGCGTGGGCGATCGTGATCGTGATCGAGAGGTGGAGCGGGTAGATGCCGAAGTCATCGTCTCCATCTCCCACCATAACCCCGATGAATCCCATAAAATCTCATCCGCAAACCCTAACCCTAACTCCATCCATAACCCTAACACCTCACGTCTCCGCCGATGACGACGCCGACTTCATCTTCCAATCCTATCACATCCACTCTCAGTCTCTGCTCTTGGACGACGACGATGATGCGGACCACGAACCTTCCACTCGCAACCCAAATCACACCCAAACCCTAGGCGACGTCCATCCCGAATCGCCCTTCTCCTCCCTCCTTCTTCGCGACCCCGACATCGACGACGAGGAGGATGAAGATGACGATCTTCATGCCCCGGCTATCGGCCATGACGCTGACTTTGAGGGGAAGATCAAAGCACAGCATTCCGCGGCGGCGCTGCCTCTCATCGACCCATCGCCTCACATCTCATCCCAATTCTACACATTCAACAGCGATTCTCATGCTCTGATGGTACGCTGCATCATCGACGGGAGGCTCGCTTCGCCGAGCGAGATCCGTCAGGCGACTCCTCGTTCCGTGCTCAAATCATGGCGCCTGGTTTGGAAGGACCGCAACGAGGACACTGCATACCTAACAGCGTGGAAGCGGATACAGGACAAGCTCCACGCGCATGTGGACGACCATGGTAATCCCTCCCTTTTCTTTAAGAACAACCCGTCACAGTGTGTCTCCCATTTCGAGCAATGGCAAGACATTGTTGCGTCCTTCCATGCTGACCCTGACCTTCTTAGACATCTGGGTCTTAAGGAGACTGTCGACAGGATCAAGCAATCATGGACTGTTGGAGCTAAATTCTATGGCATCCCCGAATCCTTCATCCGTGACTGCATCTCCTCTTGCCCTGTCTGCTCTTCATCCACCTCTATGGCCGGTCCATCCTCGTGTGCTGGAGGTGCTTCCTCCCGTTCCAAACGGCGTAGATTTGAATACACCGAGTCATTTGATGTCCCGGCTAAGGACGTTCCTCGTAGGCTTCAGCAGCTTGCAGCCAAGCACAAGGTAGTTCTGTGCATTCGACAGAAGTATATAAGGTACAAGCCTTTTATGGCGGAGGTTAAGGACTATACATGCCACCGTGCGGGAGAACCTTCGTCTGTTGCATCATCAACTTCTACCAAAAAGCCTCGGGTTCTGAAGAGGGAGCCTTACCAGTCAAAGCGATGCGGCTGTGGGTTCCGCATTCGTGCGATTGTGCCCATTACCAACTACAATGAGAAAGACAAGACTTTTGTGTATCTTGAGGAGGGAACGGCCGTGTTTAAACTATATGCAGTGCATTCTGGGCACGAGCCAGGTCCTCTGGATGGAAATGCAAGGATTATCCACAGAGTTGTAGGCCACAAGGGCAGTTTAGAATTTGATCCTGAGATATATGGGGTTCGAGAGGATACAGAACCTGAATCATTTGTCGACCTCATGGTTAAGGAAGATAGTTGCAATAGCCACCGTGCAGTTCTTCAAAAGATCCAGGAACTAAAGGTTGAGTTTGCTTTGTTAGAGGGAAAGATATCTAATATGCCACCAGAGTTACTCAGTTCACTTGCACGTGAGTTGACAGATACTCTGAGCCGGCTAAGGGGTTTTACAGGGCAACTTATGTCAGAGGAATCCTTAGTCATGGGTGATGATAATGTTGGGCAGTGGGGAAGTGAGCAAAATCATGATTTTGATGAGCATTGCAGGATTTTTGGCAGTAAAGATGCCGAAATTATTGAAGAAGATGAAGCTGATTTTCATTCTACACTTGAGCCCATTGTTCCATGGGGTTCCATGGGAGTGGTAGAGTGCCAGGAGCAAAAGATTCTCATGGGGGATAGCTGTAAGTCGGACAAATGGTTATTGAAAGAAGATTGTAGTGACTTCGATGAAAAGAACTTGCTTAATTGTGGTGAGGATGAGGACTCAAAACTGATAAAGCCTTTGAGACACGCAGCAAACATCATGACGGATTCTAATCTTGTGGCAATGCAGGTTGATGGGTTCTACTCAGAAAATGCCAAGTGGTATGATTCCCCTGTTGGTTTGGATAATGTAACAGACTCCGGGGATGGTGGGTTTAGGCATGGAGGACTAATCTTATTTGACAGGTAAGGAATTGGTTAGGATAGGCTTAGGGTGTTAAGCTAAAAGAGAGCTACTTGCTCACATTGCGGTTACAATCTCCAGCTTTCCTCAACATGGAGCCATTTGCCGGCTTGACTTCTGCATCTGTGCTACTTTTGGCTCTAGAGATGTTTCCAGTCATACAGATGCATATGGAGTGAGCACTGACCAGTAGCAACCTCTCATAGCTATCAGAATGCAGCCCTAAAGTGGAGAATAATCGGTAGAGCAAACTATGATAGTCGTTTATAGATTTGTAAAGGTGATGCATATAACACCAATCTTTTTTTTTAAGTTATCATATGGTATCCAAATGATAGCATTTTTTGTTGATAGGGGAGCTCTAGTCATAATGCTTAAATATTTATTATTTAAGCATCTTCACTTGAACTATTAATGATATAAGTGGATAAGATTCATTACGAGTGGATAAGATTCTGATAAGGTTAGGGTTTAACAAATTAATTTTAAAGAAATTAGGTATTTTATGTATAAGTATTATTTCTTTTTTAATTTGAACTTTTTTGTATAATGCATAATTTCTAGTTTTTTGTTGAGCATCCA

Network for GWHGAAEX016367

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	25.080
SRP064423	SRR2545915	Juvenile tuber	27.320
SRP108465	SRR5643513	five period of Gastrodia elata	22.140
	SRR5643514	five period of Gastrodia elata	15.190
	SRR5643515	five period of Gastrodia elata	19.420
	SRR5643524	five period of Gastrodia elata	15.180
	SRR5643525	five period of Gastrodia elata	27.130
	SRR5643528	five period of Gastrodia elata	22.030
	SRR5643658	five period of Gastrodia elata	27.770
	SRR5643659	five period of Gastrodia elata	23.260
	SRR5643660	five period of Gastrodia elata	25.820
	SRR5643661	five period of Gastrodia elata	26.990
	SRR5643662	five period of Gastrodia elata	30.710
	SRR5643663	five period of Gastrodia elata	24.730
	SRR5643664	five period of Gastrodia elata	54.180
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	22.350
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	24.750
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	19.650
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	27.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	27.920
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	30.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	23.490
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	24.500
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.210
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	17.260
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.740
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.740
SRP279888	Gastro	Gastrodia elata tuber	27.59
	Juven	Juvenile tuber	41.04
	Mother_Gastro	Mother tuber of Gastrodia elata	27.59
	Mother_Juven	Mother tuber of Juvenile	43.32