Gene detail

Detail information of GWHGAAEX016374/evm.TU.scaffold_75.72

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743855125\|ref\|XP_010941243.1\|	0	PREDICTED: WEB family protein At3g02930, chloroplastic-like [Elaeis guineensis]
Swissprot	tr\|F4I8B9\|Y1501_ARATH	3.00E-92	Putative WEB family protein At1g65010, chloroplastic (Precursor)
trEMBL	tr\|M0SZI8\|M0SZI8_MUSAM	3.00E-167	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P18090_001}
TAIR	AT5G16730	9.00E-89	Plant protein of unknown function (DUF827)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000072	2968016	2971672	+

Transcript Sequence
>GWHTAAEX016374 TAGAAGGGGCATCCCAGTAACTGTAATGACTACTTGGGGGCAAAATAGAGAGAGTGAGGCCAAATGGAGAGGCTTTCTAGGCTCCAGCTTTATTGTAAAGAATAGCTAGTTCCGTCACCATCGCCGTCTTCTCTCCTTTCCTCCCTCCTACATCGAGCGCCGCAGTTGTTTAGTATTCCAACAAACTCTCCTCATGGCGGTCGGATGTCGTGCCTGCAATTGACAACGCACCTTTCCTTTTTCTTTTTTTAGCACTCGACTCTGCCAAATCGTTGCTGTGATTTGTGGGCTCTTACATTTTCTCCACCTTGCTCAGCAGCGCCAAACTGTTCCTGATCGAAGTAGTCGGCTCAATGCTCTCATCAAAGGCTAGCATGTCAGATTCCTCCGGCAACAAAAGCACGCCAGCAACGCCTAGGGTTAATAAAAATGGAAGAATGGGATCTGCCAAGGTGGACTTTGATCTGCCTTCACCACAGCAAAACTCAACTCGTTCGCCAAAATCGGTTAACTCAAACCAAACTGGAGATCGCCGTTCTCCCAGGAATATCACTTCTTTAGATGCAAAAAAAGCCCCAAACTTCAGTGAGCAACCACGACTATCGAAGGGTTCAGAGCTTCAGGCACAGCTTGCTCTAGTGCAGGAAGATCTCAAGAAGGTGAAGGAAAAACTGGCATCGGAAGAGAAGGAGAAGTTTGAGGCACTTGAAGAGCTGAAGGAAGCAAAAAAGGCGGTGGATATTGCAAATGAGAAGCTGGAAGATGCTCTCCTTTCTCAAAAACTTGCTAAAGAGAGTTCAGAGCTTGACAAGTTTCGCGCTGACGAAGTGGAACAATCGGCCATTGAAGCTGCTCAAAAGAAAGAGGAAGAATGGATAAAAGAGCTTGGGGATGTAAGAAATCAGCAGGCTGTTGATGCTGCTGCACTCCTTTCAGTATCCCAGGAACTTCAGAGAGTTAAGCAAGAGCTGGAAATGACCACAGATGCTAAGGATACTGCTCTGAGCCATGCTGATAATGCTATGAAGATCAGTGAGATCAATGTAGTGAAGGTGGAAATGCTCTCTAAAGAAATCAGCGATATGAAAACCTTACTCGAATCGGAGTTTGATAGACATGCCAAGGAGATGGCAGAGGTCATTAGTAAGTTTGATTCTGAGGCTGATGTTTTGAAGCATGAACTTGGAAAGGCAAAGGCATCTGAGGAGAAGTTGATTGATACTGAAGCATTAGTTAAAGAGCTTGAGATTCAGGTATTGAATTTAAGGATGGCTGAATCAAATACACTTGGTGTTACTGATGAGCAGAAGAAGAAGGTCGAGCTCTTAGAATCTCAGTTGGAGAAAACCCGGCAGTCTGAAAGCACATTGAATCACTCTCTCGTTTCTATGAAGAAACAACTAGAAGAAAGGGTGGTTGCATTTAATGATGCCAAATCTGAGATTAATTCACTCAATGCTAAAGTAGAGATTTTAGAGTTTGAGGTGTGCAGGCACAAGGATGATCTTAAAGAATCAAATCTAAAACTTGATTTGTCACAGCAGAAAAGGTCGAGTTTGGAGAAGAAAGCTGAAGCTCTGAAGTCCGAGGTTCAAAAAATGGAGGAATTGAAGGCACTTGCCCTGAATAACGAAAAGGATGCATGTTTGAATGTTGAAAGCCTTACCCATGAAAATAACAGGCTTGCGGTTGAGCTGGAGTTTGCTAGAGAAGAATCCGGGAAAACTAAGAAAGCTATAGATAAGTTGATTTCAGCATTGCATGAAATTTCTATGGAAACCAGGGACGCTCAAGAAAGGCTTTTGATTAAGCAAACCCAACTTGACAATGCCTCTGCAGAGGCGGAGGAATTGAAATCAGCCCTCAAAATTGCGCAGGAAAAACATGAGCTCATTCTCGATCAAGCCAAATATGAGATTATTTGTCTTAAGAAGGATGTTGAAAAATCCAAAGCAGAAGTGAGGGACTTGAGAGCTGAATTGGATCTGAAGGAGCATTCATTGTTGTCTGTCACAAAAAAATCGGAGGAAGAAATTGCTGCTATTAAGCTGCAGAAGAATAATGCAGTCGTGACACTTGAGAGACTGAAGGATGAAACGAAAACTGCCGAGAAAGAGGCGAGCTTGCTCAAGAATAAAATGAAACTTGTTGAAACAGAGTTAAGTGTGGCCAAAGAAGCCATGGAAGAAGTGATGGCTGAGACTATAAACTTGAACGAAAGAATGCTGAATAAAGAGAATCAACTACAGAGCATAATCCAGGAGAACGATGAGCTCCGGATTCGAGATGCTGCTGCTTCCGAAAAAATTGCAGAACTTTCAAACTTGCTCGCTGAATTGACTGCCTGCGAGATTAATGAAAATGGTGATGTAGGAAGAAATGGTGAAAATGGAGAAAACGGAGAACGATATGACAGCTACAAAGAGTCTGATTTACTGTTACTTGTCACAGAAGGCATGCAAGAGGTTGTTACTGAAGCTAAAACAGAAGAAGCATCGGAATCAGGATCTCGGATTGAACGTTCAGAGGAAACCCTGAAGAAGGAACCGAAATTGGTGGAAATGGATAAAGCCAATGGTAATGATACGGAAAATCGTGATGGGCATGAAAATTTTGTGAAAGAGGAGCTTTCTGAAGGTGTTAAAGTTATTGATAAGCAGCTGACTTTGGAGAAGGACTATACTGAATCAGCTGAAGATGAGACCGATTCAAAGCTTGAATGCCTTGATCATCCCAAAGGAGACAATGTGAGGAATGGAAGCAACAACTTGTCGCCAGAAAAGCAGCAGCCGCAGCAACTGCTTAAGAAAAAGAAGCCCTTGCTGCAAAAGTTTGGCAGCATGCTGAAGAAGAAGAGCAATCCCAAGTAGGCTTCCTGTTTTTGCATTGTGTTTAACCAGTGCTGTCTAAAATAGTAGGCATGTAGAGATTTTTAGATATGAAGCTTGCTTGTTTTTTTTGTCAAGTTATTTGTTTGATATGGGATTTTCTTCTTGCCACATTCCTACATGAAACTTGATGCAGTTACCCTCATTGGATTTAAACTTTATTGCGCAATCATTTGATTGGAATACAGAATTTTCTTTAGTGATTTGTTGAGGAAAAATAGTACTGAACTGTTGAGTTGAGGATTAAAGCTACACAGCTGTTTGTCGGTTGTTTCCTCTATAATATGTTTCACTTTCCGGATTTGCAACTATGTTTTGAAATTCGAGCAAGCTAAC

Network for GWHGAAEX016374

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05701.10	WEMBL	85	402	6.80E-11

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	26.550
SRP064423	SRR2545915	Juvenile tuber	37.780
SRP108465	SRR5643513	five period of Gastrodia elata	20.670
	SRR5643514	five period of Gastrodia elata	14.700
	SRR5643515	five period of Gastrodia elata	15.470
	SRR5643524	five period of Gastrodia elata	15.880
	SRR5643525	five period of Gastrodia elata	7.330
	SRR5643528	five period of Gastrodia elata	6.510
	SRR5643658	five period of Gastrodia elata	6.990
	SRR5643659	five period of Gastrodia elata	24.200
	SRR5643660	five period of Gastrodia elata	18.430
	SRR5643661	five period of Gastrodia elata	22.460
	SRR5643662	five period of Gastrodia elata	21.300
	SRR5643663	five period of Gastrodia elata	25.010
	SRR5643664	five period of Gastrodia elata	21.410
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	20.450
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.140
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	25.420
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	22.280
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	18.520
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	16.910
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.080
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	27.990
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	26.040
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	16.300
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	18.620
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	18.620
SRP279888	Gastro	Gastrodia elata tuber	16.45
	Juven	Juvenile tuber	10.77
	Mother_Gastro	Mother tuber of Gastrodia elata	2.77
	Mother_Juven	Mother tuber of Juvenile	2.44