Detail information of GWHGAAEX016378/evm.TU.scaffold_75.79
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|743879792|ref|XP_010908482.1| | 1.30E-174 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Elaeis guineensis] |
| Swissprot | tr|Q84Y01|ITPK1_MAIZE | 8.00E-144 | Inositol-tetrakisphosphate 1-kinase 1 |
| trEMBL | tr|F6HT70|F6HT70_VITVI | 3.00E-159 | Inositol-tetrakisphosphate 1-kinase {ECO:0000256|PIRNR:PIRNR038186} |
| TAIR | AT5G16760 | 8.00E-133 | Inositol 1,3,4-trisphosphate 5/6-kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000072 | 3015960 | 3017621 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016378
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05770.10 | Ins134_P3_kin | 72 | 372 | 2.00E-131 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00913 | ITPK1 | Metabolic pathways | map01100 |
| Inositol phosphate metabolism | map00562 | ||
| Phosphatidylinositol signaling system | map04070 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0032957 | Biological Process | inositol trisphosphate metabolic process |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0052725 | Molecular Function | inositol-1,3,4-trisphosphate 6-kinase activity |
| GO:0047325 | Molecular Function | inositol tetrakisphosphate 1-kinase activity |
| GO:0046872 | Molecular Function | metal ion binding |
| GO:0000287 | Molecular Function | magnesium ion binding |
| GO:0052726 | Molecular Function | inositol-1,3,4-trisphosphate 5-kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 27.310 |
| SRR2545915 | Juvenile tuber | 25.080 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 36.020 |
| SRR5643514 | five period of Gastrodia elata | 35.420 | |
| SRR5643515 | five period of Gastrodia elata | 32.380 | |
| SRR5643524 | five period of Gastrodia elata | 36.060 | |
| SRR5643525 | five period of Gastrodia elata | 38.410 | |
| SRR5643528 | five period of Gastrodia elata | 30.330 | |
| SRR5643658 | five period of Gastrodia elata | 39.590 | |
| SRR5643659 | five period of Gastrodia elata | 30.310 | |
| SRR5643660 | five period of Gastrodia elata | 29.100 | |
| SRR5643661 | five period of Gastrodia elata | 31.830 | |
| SRR5643662 | five period of Gastrodia elata | 29.030 | |
| SRR5643663 | five period of Gastrodia elata | 29.850 | |
| SRR5643664 | five period of Gastrodia elata | 31.180 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 32.530 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 30.430 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 35.480 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 28.670 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 35.260 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 29.580 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 30.700 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 26.300 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 29.330 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 37.080 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 43.870 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 43.870 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 31.16 |
| Juven | Juvenile tuber | 28.71 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 32.39 | |
| Mother_Juven | Mother tuber of Juvenile | 19.30 |