Gene detail

Detail information of GWHGAAEX016384/evm.TU.scaffold_75.87

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743760725\|ref\|XP_010938481.1\|	2.68E-94	PREDICTED: uncharacterized protein LOC105057526 [Elaeis guineensis]
trEMBL	tr\|A0A061ELS0\|A0A061ELS0_THECC	1.00E-88	Emb:CAB10253.1 isoform 5 {ECO:0000313\|EMBL:EOY05781.1}
TAIR	AT3G22810	2.00E-89	Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000072	3192998	3204069	-

Transcript Sequence
>GWHTAAEX016384 CAAAACAGAACGCGAACAAGCAACAGCCGAGCAGTTCCCAGCTACCTCCATATATCGTTCTGTAAATTCACCGCGTCCTCCACTGAAGCAAACTCCTGGCAGAATGCGCGACTTCCGAGATCGCATCCTTCTCCGGTCGCCGGAGACGCCTCTCGATCCGATGAAGTTTTTGTCTTACTGGTGGAGCGCCTCATCTCTCGAGCCCCGCCCCATGGCGATTTCTTCTGATTCGCCGGAATTCGATTTGGACCAACTGGAAAGGTCATCTTTGTCCTCTGGTTGTCTTTCTAACAGCAGCAGTCTTCTCAATGGCAGCTATCCCACCAACAGCACGCCAATCTCTCCTCCTGCTCTTGATGATTTAAAGGAAGGGTCATCACTGTCCTCCGATTGCCTTTCACAAAGCAGCAGCCTTCTCGATAATGGGTATCTCACCCACAACACGCCAATCTCTCCTCCTGTTCTTGATGATCTAAAGTTTACCCAAACAGCACCAGCAGCGTCCATGGCCCCGCAGCTTAGGTCATCTAGCAGCGACAGAATAGTCGGGAGATGGATCAAGGAAAGGAGAGATAGGAAGAAGGAAAAGGCAGAGGCTCATAAAGCACAATTGCATGCCGCAGTCTCCATCATAGGGGCCGCCTCGTCTGCGGCGGCATTGGCGGCAGCAGAAACAGAAAAAATAACGGTATCTAAACAGCTTCTTCCAAACAAGCGCTCGTCACAGACAAGCACGACTGCAGCCATGCTCGTTGCAGCGCAGTGCGTGGAGGAGGCTAAGGCCATCGACGCTGCTGACGACCACCTAGCATCCATCATTGAGACTGCCAGCAGTGTCCGTAACTCAGAAGGCATTGCCACTCTTACAGCGACCGCAGCCACTGCTTTGAAGGGAGCTGCTCACTTGAAGGGCAACAAGGCCTCCAGGGAGAAGGCGGAGAAGGCGGAGAAGGCGGAGAAGAGTGACACAAGCTCTCACTCTGAGAATTTTTTCCTTTGTCAGCACCAAGTTAATTGCTCCACGACATCAGATTGGAAATGTGCTGAATTGAGGTATGAGGAGAACTTCCTTGGCATCTGCAGCAGGGAGGTTCTTGCTCGTGGTGCCCAACTGTTAAAGAGAACCCGGAATGGCGCTCTTCACTGGAAAATTGTCTCAGTTTACATGAGCAAGATGGGTCGGGTGACGCTAAAGATGAAGAGCAAGCACATTGCTGGAACTATTACAAAGACGAAAAAGAATGTGATTGTAGATGTTTGCAAGAAGGTTCAGGCGTGGCCGCGCCGGTTCATACTAGACGGCGAAGAACAGCGGTGCTACTTTGGCCTGAAGACCTCAGATAGACGGATTATAGAATTCGAGTGCAAGACCGAAAGGGAGCACGAGATATGGACGCAGGGTGTCACCTATCTCCTCAACATCTCAAGAGAGGGGAGGAGAGCCGGGCCTCAGGCCACAACCAGCTAGTTGCAGGTAGATTGTTTTGTAAGAAGCCCTGTTCATAAGTTTTATGCTTTGATTACAACTGCTTAGCTGCTAGCATATTATGTACAGTCAATTCTATTTCATTTTTTCCACCCACAGAAAAAATAAAGAGTCTATTTCATAAAAAACTTAGCGTTGAGTGCATAATAGTTAAATTACATTGATCAGATCATGCTTTAAAGACATTAAATGCATTTTTGGCTGTGTATTTGCCTAGAACTGTTATACATAGTATCTTGTAACTAAAATGTATGCTACATGTAATGGATATCACAAAAAAGAAGGGCAGGGAAATTGTAGTTATGCCCATGCCCGAGAAATATTCACAAGAGAAATTTCATGAATCCACCGTGCTGAGGATGGTCGTGATCGACAAGAAGAGGTTGATAATGTCGAGGTAAAGGCTGATCGCAGCGGAGACGTATTCATCGTAGGAGTGGCTCTTGTTCAGGTTGCCGATGTCGTAAATTATGAAAGCGGCGAAACACGATTGCCGCCAAGCATCCGAAGATGGCTTCTCCGACTCTCCCCACCGGGAGATACATCTGCATTGTCGTTGGATAGTATTTTGTATAGCTAGAATGCATGGTGGACGGACTGTTTATAATGTCGAAGCACATTTTAAGGGTTTTTTATCTGAACAAACATGTAGATGATCATGACAAGAAGGGATGCGGCTAAGAATGTCCCCAGAAAATTGAAGTCATGGCCTCGCTTGGCTGCCCGGAATGTATACAGTGTGAGCACAATCACAACTATTCCGGTAAGCCCTGCAGCTTCTACTATCACTTTACCTGTTTGGAAATGTGCCCAATATATATGTATAGGGAAAAGATAGAAAATTTGTATATGCTCACACAAAAAAAGGCAGTCATCAATAATGGCAGCTTACAGGATTGTAGATTTTGCTTTCACATATCAAGCTCTCAAAGTTTACTATTATTTTTGTATATGGCAATAATTGTTTACATGGCTTACTATTTGTATATCAATGATTGATGTAAGTTACATTATGGGGATTTGGATGGCGA

Network for GWHGAAEX016384

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05703.10	Auxin_canalis	13	280	1.10E-47
PF08458.9	PH_2	336	441	6.90E-37

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.030
SRP064423	SRR2545915	Juvenile tuber	5.100
SRP108465	SRR5643513	five period of Gastrodia elata	5.800
	SRR5643514	five period of Gastrodia elata	5.210
	SRR5643515	five period of Gastrodia elata	11.670
	SRR5643524	five period of Gastrodia elata	5.050
	SRR5643525	five period of Gastrodia elata	7.770
	SRR5643528	five period of Gastrodia elata	7.690
	SRR5643658	five period of Gastrodia elata	7.590
	SRR5643659	five period of Gastrodia elata	7.650
	SRR5643660	five period of Gastrodia elata	5.270
	SRR5643661	five period of Gastrodia elata	6.760
	SRR5643662	five period of Gastrodia elata	9.080
	SRR5643663	five period of Gastrodia elata	7.030
	SRR5643664	five period of Gastrodia elata	8.400
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.090
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.060
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.070
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.230
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.390
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.550
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.680
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.820
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.410
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.510
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.510
SRP279888	Gastro	Gastrodia elata tuber	5.58
	Juven	Juvenile tuber	4.76
	Mother_Gastro	Mother tuber of Gastrodia elata	13.50
	Mother_Juven	Mother tuber of Juvenile	15.66