Detail information of GWHGAAEX016387/evm.TU.scaffold_75.90


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383455460|ref|YP_005369449.1|2.00E-87alcohol dehydrogenase [Corallococcus coralloides DSM 2259]
KOGKOG00232.00E-120Alcohol dehydrogenase, class V
nrgi|255587478|ref|XP_002534286.1|1.44E-121alcohol dehydrogenase, putative [Ricinus communis]
Swissprottr|O65621|CADH6_ARATH5.00E-121Probable cinnamyl alcohol dehydrogenase 6
trEMBLtr|B9T7R7|B9T7R7_RICCO5.00E-122Alcohol dehydrogenase, putative {ECO:0000313|EMBL:EEF28097.1}
TAIRAT4G379702.00E-120cinnamyl alcohol dehydrogenase 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007232468623248296-
Transcript Sequence

Network for GWHGAAEX016387

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08240.11ADH_N7861.50E-12
PF00107.25ADH_zinc_N1292524.70E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K2323210HGO Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Monoterpenoid biosynthesismap00902

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.070
SRR2545915Juvenile tuber9.660
SRP108465SRR5643513five period of Gastrodia elata62.910
SRR5643514five period of Gastrodia elata19.900
SRR5643515five period of Gastrodia elata27.140
SRR5643524five period of Gastrodia elata22.800
SRR5643525five period of Gastrodia elata0.320
SRR5643528five period of Gastrodia elata0.640
SRR5643658five period of Gastrodia elata0.160
SRR5643659five period of Gastrodia elata8.220
SRR5643660five period of Gastrodia elata12.830
SRR5643661five period of Gastrodia elata8.560
SRR5643662five period of Gastrodia elata6.870
SRR5643663five period of Gastrodia elata5.730
SRR5643664five period of Gastrodia elata5.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_197.190
SRR6049655Rhizomagastrodiae_C368-T10_good_1121.450
SRR6049656Rhizomagastrodiae_C368-T07_good_1146.850
SRR6049657Rhizomagastrodiae_C368-T07_good_177.360
SRR6049658Rhizomagastrodiae_C368-T04_good_1153.910
SRR6049659Rhizomagastrodiae_C368-T04_good_1145.950
SRR6049660Rhizomagastrodiae_C368-T01_good_1118.630
SRR6049661Rhizomagastrodiae_C368-T04_good_1150.320
SRR6049662Rhizomagastrodiae_C368-T01_good_1146.030
SRR6049663Rhizomagastrodiae_C368-T01_good_1196.370
SRR6049664Rhizomagastrodiae_C368-T10_good_1200.700
SRR6049665Rhizomagastrodiae_C368-T10_good_1200.700
SRP279888GastroGastrodia elata tuber 46.46
JuvenJuvenile tuber29.93
Mother_GastroMother tuber of Gastrodia elata 82.72
Mother_JuvenMother tuber of Juvenile 19.36