Detail information of GWHGAAEX016391/evm.TU.scaffold_75.96


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|9.00E-30hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG01923.00E-165Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
nrgi|743824487|ref|XP_010932793.1|2.57E-173PREDICTED: serine/threonine-protein kinase HT1 isoform X1 [Elaeis guineensis]
Swissprottr|Q2MHE4|HT1_ARATH8.00E-64Serine/threonine-protein kinase HT1
trEMBLtr|M1SX00|M1SX00_ORYSI1.00E-169Mitogen activated protein kinase kinase kinase 27 {ECO:0000313|EMBL:AGG38032.1}
TAIRAT3G227503.00E-165Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007233539953364566+
Transcript Sequence

Network for GWHGAAEX016391

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr603383.10E-58
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-4

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.800
SRR2545915Juvenile tuber12.250
SRP108465SRR5643513five period of Gastrodia elata23.540
SRR5643514five period of Gastrodia elata41.900
SRR5643515five period of Gastrodia elata33.410
SRR5643524five period of Gastrodia elata36.250
SRR5643525five period of Gastrodia elata9.870
SRR5643528five period of Gastrodia elata10.010
SRR5643658five period of Gastrodia elata9.250
SRR5643659five period of Gastrodia elata19.340
SRR5643660five period of Gastrodia elata24.770
SRR5643661five period of Gastrodia elata28.440
SRR5643662five period of Gastrodia elata25.440
SRR5643663five period of Gastrodia elata22.490
SRR5643664five period of Gastrodia elata19.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.980
SRR6049655Rhizomagastrodiae_C368-T10_good_133.630
SRR6049656Rhizomagastrodiae_C368-T07_good_124.160
SRR6049657Rhizomagastrodiae_C368-T07_good_114.070
SRR6049658Rhizomagastrodiae_C368-T04_good_121.220
SRR6049659Rhizomagastrodiae_C368-T04_good_118.690
SRR6049660Rhizomagastrodiae_C368-T01_good_114.910
SRR6049661Rhizomagastrodiae_C368-T04_good_113.080
SRR6049662Rhizomagastrodiae_C368-T01_good_125.350
SRR6049663Rhizomagastrodiae_C368-T01_good_123.400
SRR6049664Rhizomagastrodiae_C368-T10_good_139.350
SRR6049665Rhizomagastrodiae_C368-T10_good_139.350
SRP279888GastroGastrodia elata tuber 14.40
JuvenJuvenile tuber7.76
Mother_GastroMother tuber of Gastrodia elata 14.85
Mother_JuvenMother tuber of Juvenile 13.16