Gene detail

Detail information of GWHGAAEX016392/evm.TU.scaffold_75.97

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|262194545\|ref\|YP_003265754.1\|	2.00E-28	cytochrome P450 [Haliangium ochraceum DSM 14365]
KOG	KOG0156	1.00E-118	Cytochrome P450 CYP2 subfamily
nr	gi\|743886339\|ref\|XP_010910121.1\|	6.61E-147	PREDICTED: cytochrome P450 71A1-like [Elaeis guineensis]
Swissprot	tr\|P24465\|C71A1_PERAE	4.00E-121	Cytochrome P450 71A1
trEMBL	tr\|W9S8S4\|W9S8S4_9ROSA	1.00E-131	Cytochrome P450 71A1 {ECO:0000313\|EMBL:EXB94456.1}
TAIR	AT3G26320	1.00E-118	cytochrome P450, family 71, subfamily B, polypeptide 36

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000072	3393996	3395669	-

Transcript Sequence
>GWHTAAEX016392 ATGGAGATCCTGCATCCCATTCCTCTACTGCTGACGACAGCGTTGTGCTTCTTCTTCATCAGCTTCCTCTGGCGGAGGCGGGAGAAGCCTTGGAGGCTGCCTCCGGGCCCTCCGCCGATCCCGGTGATAGGCAACCTTCACAGCCTCGGCGAGTTTCTGCACATTACGTTCGACGGGCTCTCTAAAAAATACGGCCCGATAATGCACCTGCGGTTCGGCAGCGTCCCGGTTCTGGTCATCTCAAGCACGGACCTCGCTGCCGAGATCCTGAGAAACCAAGACCACGTGCGGCGGGTATGCAACTTGGAGCTCTTCGGTCTCGGCAGGGTCCAGTCGTTTGCCGCGCTCCGAAGCGAGGAGGTCGACGCGCTACTGAGCACTGTGTCGAAGGCAGCAACCTCGGGCTTTGCGCTGAATTTGAGCGAGGCGCTGCTCTGCTGCGTCAACAACATCACCTTTCGCCAGGTCTTTGGGGAGAGGATATCGGCGGAAGGCGAATGCGGCTCCAGCCCGCACCAATACCTGCTCCGAGAGATCATGAAGCTCCTACAGGGCTTCGCCGCCGAGGACTTCTTCCCGCTCATCGGCCCGCTCGTGGACCGCCTCAGTGGGCATCGCGGCAATCTGGAGAGGGTTTTCGCCGAGATGGATTCGCTCTTCGACGAGAAGATAAGAAGGAGGCTGCCGCTTAAGGAAACCGGCCACCATCTGGATTTACTCGACGTGCTTCTTCGTCTCCAGGCCGATGCTTCTCTTACCATGAATCAAGTCAAAGCTATTCTCATGGACATGTTTGCCGGGGGAATAGATTCAAGTGTAATATTACTAGAATGGGGGATGACGCAGCTGGTAAAGAACCCAGCAAGTCTAGACAAGGCAGTGAATGAGGTGCGAGAGATCATCGGCAACAAAGGGAAGGTGGAGGAGACAGACTTGCAACATCTTCATTATCTTAAATTGGTAATCAAAGAAACGTTAAGGCTGCATATTCCTGGACCCCTACTGATACCGCGGGAGAACAAGGAAAGCACCGAGTTATCTGGATACGATATTCCGGCAAACACAAGGGTGTACATAAATGCATGGACTATGGGGAGGGATCCTAAATCTTGGGTCGATCCTCAACTCTTTTGGCCCGAGAGATTCAGGGATAGCCCCATTAATTTCAAGGGGGGCTACTTCGAGTTCATACCATTTGGTGCAGGAAGAAGGATCTGTCCTGGAATGGCACTGGCCATGGCTAGTGTTGAGATTATTTTTGCCAACATTCTCTATGCATTCGATTGGAAATTGCCGGGCGACATGGCCAAAGATGATCTGGACATGAGTCTCGCACCAGGGTTGTTTGCACAAAAGAAAGTGCCTCTAATTTTGATGGCAAAGCCTGCTTTTGTCATATCTTAAATAAATTGAATGTCTTTTCAAGAATAAATTCATTATTTATGCTCTTGTTATCTTTAGTATATTTTGT

Network for GWHGAAEX016392

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	34	94	1.40E-09
PF00067.21	p450	96	443	1.70E-71

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B36

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0005506	Molecular Function	iron ion binding
GO:0020037	Molecular Function	heme binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.270
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.170
	SRR5643514	five period of Gastrodia elata	0.210
	SRR5643515	five period of Gastrodia elata	0.260
	SRR5643524	five period of Gastrodia elata	0.280
	SRR5643525	five period of Gastrodia elata	0.050
	SRR5643528	five period of Gastrodia elata	0.060
	SRR5643658	five period of Gastrodia elata	0.090
	SRR5643659	five period of Gastrodia elata	0.000
	SRR5643660	five period of Gastrodia elata	0.050
	SRR5643661	five period of Gastrodia elata	0.000
	SRR5643662	five period of Gastrodia elata	0.000
	SRR5643663	five period of Gastrodia elata	0.040
	SRR5643664	five period of Gastrodia elata	0.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.090
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.090
SRP279888	Gastro	Gastrodia elata tuber	0.00
	Juven	Juvenile tuber	0.01
	Mother_Gastro	Mother tuber of Gastrodia elata	0.18
	Mother_Juven	Mother tuber of Juvenile	0.13